Experiment: Phosphomycin 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_15360 and PS417_15365 overlap by 13 nucleotides PS417_15365 and PS417_15370 are separated by 73 nucleotides PS417_15370 and PS417_15375 overlap by 86 nucleotides
PS417_15360: PS417_15360 - histidine kinase, at 3,370,015 to 3,371,157
_15360
PS417_15365: PS417_15365 - diaminopimelate epimerase, at 3,371,145 to 3,371,948
_15365
PS417_15370: PS417_15370 - kinase, at 3,372,022 to 3,372,597
_15370
PS417_15375: PS417_15375 - peptidoglycan-binding protein, at 3,372,512 to 3,374,107
_15375
Position (kb)
3371
3372 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3370.277 kb on + strand, within PS417_15360 at 3370.360 kb on + strand, within PS417_15360 at 3370.360 kb on + strand, within PS417_15360 at 3370.553 kb on + strand, within PS417_15360 at 3370.557 kb on + strand, within PS417_15360 at 3370.557 kb on + strand, within PS417_15360 at 3370.558 kb on - strand, within PS417_15360 at 3370.558 kb on - strand at 3370.558 kb on - strand, within PS417_15360 at 3370.950 kb on + strand, within PS417_15360 at 3370.950 kb on + strand, within PS417_15360 at 3370.950 kb on + strand, within PS417_15360 at 3370.950 kb on + strand, within PS417_15360 at 3370.950 kb on + strand, within PS417_15360 at 3370.951 kb on - strand, within PS417_15360 at 3370.951 kb on - strand, within PS417_15360 at 3370.951 kb on - strand, within PS417_15360 at 3370.955 kb on - strand, within PS417_15360 at 3371.056 kb on + strand at 3371.096 kb on + strand at 3371.152 kb on - strand at 3371.152 kb on - strand at 3371.155 kb on + strand at 3371.156 kb on - strand at 3371.156 kb on - strand at 3371.661 kb on - strand, within PS417_15365 at 3372.026 kb on + strand at 3372.104 kb on - strand, within PS417_15370 at 3372.427 kb on + strand, within PS417_15370 at 3372.427 kb on + strand, within PS417_15370 at 3372.427 kb on + strand, within PS417_15370 at 3372.558 kb on + strand at 3372.559 kb on - strand at 3372.574 kb on - strand at 3372.613 kb on - strand at 3372.813 kb on + strand, within PS417_15375 at 3372.813 kb on + strand, within PS417_15375 at 3372.814 kb on - strand, within PS417_15375
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.003 mg/ml remove 3,370,277 + PS417_15360 0.23 +0.2 3,370,360 + PS417_15360 0.30 -0.4 3,370,360 + PS417_15360 0.30 +1.3 3,370,553 + PS417_15360 0.47 -0.3 3,370,557 + PS417_15360 0.47 -1.7 3,370,557 + PS417_15360 0.47 -0.7 3,370,558 - PS417_15360 0.48 -0.3 3,370,558 - +3.1 3,370,558 - PS417_15360 0.48 +0.4 3,370,950 + PS417_15360 0.82 +1.2 3,370,950 + PS417_15360 0.82 +1.5 3,370,950 + PS417_15360 0.82 -0.5 3,370,950 + PS417_15360 0.82 -0.0 3,370,950 + PS417_15360 0.82 -0.1 3,370,951 - PS417_15360 0.82 -0.1 3,370,951 - PS417_15360 0.82 +0.0 3,370,951 - PS417_15360 0.82 -0.0 3,370,955 - PS417_15360 0.82 -1.3 3,371,056 + -0.1 3,371,096 + -0.5 3,371,152 - -0.4 3,371,152 - +0.9 3,371,155 + +0.4 3,371,156 - -1.3 3,371,156 - +1.2 3,371,661 - PS417_15365 0.64 -0.7 3,372,026 + -0.1 3,372,104 - PS417_15370 0.14 -1.9 3,372,427 + PS417_15370 0.70 +0.3 3,372,427 + PS417_15370 0.70 -0.3 3,372,427 + PS417_15370 0.70 +0.4 3,372,558 + -0.3 3,372,559 - +0.5 3,372,574 - +0.2 3,372,613 - -1.3 3,372,813 + PS417_15375 0.19 -0.1 3,372,813 + PS417_15375 0.19 -0.7 3,372,814 - PS417_15375 0.19 +0.5
Or see this region's nucleotide sequence