Experiment: Phosphomycin 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03725 and PS417_03730 are separated by 0 nucleotides PS417_03730 and PS417_03735 are separated by 85 nucleotides PS417_03735 and PS417_03740 are separated by 91 nucleotides
PS417_03725: PS417_03725 - acyltransferase, at 843,873 to 844,772
_03725
PS417_03730: PS417_03730 - phosphate acetyltransferase, at 844,773 to 846,872
_03730
PS417_03735: PS417_03735 - hypothetical protein, at 846,958 to 847,149
_03735
PS417_03740: PS417_03740 - peptidylprolyl isomerase, at 847,241 to 847,726
_03740
Position (kb)
844
845
846
847 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 843.818 kb on + strand at 843.818 kb on + strand at 843.818 kb on + strand at 843.819 kb on - strand at 843.985 kb on + strand, within PS417_03725 at 844.062 kb on + strand, within PS417_03725 at 844.252 kb on - strand, within PS417_03725 at 844.465 kb on + strand, within PS417_03725 at 844.517 kb on - strand, within PS417_03725 at 844.517 kb on - strand, within PS417_03725 at 844.529 kb on - strand, within PS417_03725 at 844.758 kb on + strand at 844.774 kb on + strand at 844.774 kb on + strand at 844.778 kb on + strand at 844.778 kb on + strand at 844.779 kb on - strand at 844.784 kb on + strand at 844.785 kb on - strand at 844.785 kb on - strand at 844.825 kb on + strand at 844.975 kb on - strand at 845.047 kb on + strand, within PS417_03730 at 845.156 kb on - strand, within PS417_03730 at 845.388 kb on - strand, within PS417_03730 at 845.892 kb on - strand, within PS417_03730 at 845.914 kb on + strand, within PS417_03730 at 846.910 kb on + strand at 846.910 kb on + strand at 846.910 kb on + strand at 846.910 kb on + strand at 846.910 kb on + strand at 846.911 kb on - strand at 847.277 kb on + strand at 847.278 kb on - strand at 847.280 kb on - strand at 847.280 kb on - strand at 847.340 kb on + strand, within PS417_03740 at 847.357 kb on + strand, within PS417_03740 at 847.358 kb on - strand, within PS417_03740 at 847.358 kb on - strand, within PS417_03740 at 847.425 kb on + strand, within PS417_03740 at 847.452 kb on - strand, within PS417_03740 at 847.742 kb on + strand at 847.742 kb on + strand at 847.746 kb on + strand at 847.746 kb on + strand at 847.851 kb on + strand at 847.852 kb on - strand at 847.852 kb on - strand at 847.852 kb on - strand at 847.852 kb on - strand at 847.852 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.002 mg/ml remove 843,818 + -0.1 843,818 + -0.7 843,818 + +0.4 843,819 - +0.6 843,985 + PS417_03725 0.12 +0.2 844,062 + PS417_03725 0.21 +2.0 844,252 - PS417_03725 0.42 +0.7 844,465 + PS417_03725 0.66 -0.2 844,517 - PS417_03725 0.72 -0.6 844,517 - PS417_03725 0.72 -0.1 844,529 - PS417_03725 0.73 +2.0 844,758 + +0.3 844,774 + +0.1 844,774 + -0.2 844,778 + +0.1 844,778 + -0.0 844,779 - +0.4 844,784 + +0.1 844,785 - -0.9 844,785 - +1.2 844,825 + -0.0 844,975 - -0.5 845,047 + PS417_03730 0.13 -0.7 845,156 - PS417_03730 0.18 +1.3 845,388 - PS417_03730 0.29 +0.4 845,892 - PS417_03730 0.53 -0.6 845,914 + PS417_03730 0.54 +2.0 846,910 + +0.7 846,910 + -1.1 846,910 + +0.4 846,910 + -1.2 846,910 + +0.9 846,911 - -0.2 847,277 + +0.0 847,278 - -0.1 847,280 - -0.6 847,280 - +1.3 847,340 + PS417_03740 0.20 -2.4 847,357 + PS417_03740 0.24 -1.4 847,358 - PS417_03740 0.24 -1.1 847,358 - PS417_03740 0.24 -0.6 847,425 + PS417_03740 0.38 +0.2 847,452 - PS417_03740 0.43 -0.7 847,742 + -0.5 847,742 + -0.1 847,746 + -0.9 847,746 + +1.7 847,851 + +0.7 847,852 - -0.1 847,852 - -0.2 847,852 - -2.1 847,852 - -0.6 847,852 - -0.0
Or see this region's nucleotide sequence