Experiment: Phosphomycin 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03325 and PS417_03330 are separated by 261 nucleotides PS417_03330 and PS417_03335 are separated by 185 nucleotides
PS417_03325: PS417_03325 - acid phosphatase, at 760,842 to 762,542
_03325
PS417_03330: PS417_03330 - Short chain fatty acid transporter, at 762,804 to 764,222
_03330
PS417_03335: PS417_03335 - MFS transporter, at 764,408 to 765,697
_03335
Position (kb) 762
763
764
765 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 761.821 kb on + strand, within PS417_03325 at 761.821 kb on + strand, within PS417_03325 at 761.822 kb on - strand, within PS417_03325 at 761.822 kb on - strand, within PS417_03325 at 762.013 kb on + strand, within PS417_03325 at 762.086 kb on - strand, within PS417_03325 at 762.113 kb on - strand, within PS417_03325 at 762.510 kb on + strand at 762.634 kb on + strand at 762.656 kb on + strand at 762.727 kb on - strand at 762.727 kb on - strand at 762.852 kb on + strand at 762.955 kb on + strand, within PS417_03330 at 762.956 kb on - strand, within PS417_03330 at 762.956 kb on - strand, within PS417_03330 at 762.956 kb on - strand, within PS417_03330 at 762.956 kb on - strand, within PS417_03330 at 762.997 kb on + strand, within PS417_03330 at 763.025 kb on - strand, within PS417_03330 at 763.054 kb on + strand, within PS417_03330 at 763.055 kb on - strand, within PS417_03330 at 763.055 kb on - strand, within PS417_03330 at 763.117 kb on + strand, within PS417_03330 at 763.138 kb on + strand, within PS417_03330 at 763.138 kb on + strand, within PS417_03330 at 763.138 kb on + strand, within PS417_03330 at 763.138 kb on + strand, within PS417_03330 at 763.138 kb on + strand, within PS417_03330 at 763.139 kb on - strand, within PS417_03330 at 763.139 kb on - strand, within PS417_03330 at 763.178 kb on + strand, within PS417_03330 at 763.179 kb on - strand, within PS417_03330 at 763.179 kb on - strand, within PS417_03330 at 763.179 kb on - strand, within PS417_03330 at 763.768 kb on + strand, within PS417_03330 at 763.769 kb on - strand, within PS417_03330 at 763.987 kb on + strand, within PS417_03330 at 764.236 kb on + strand at 764.236 kb on + strand at 764.236 kb on + strand at 764.237 kb on - strand at 764.237 kb on - strand at 764.237 kb on - strand at 764.238 kb on + strand at 764.238 kb on + strand at 764.238 kb on + strand at 764.238 kb on + strand at 764.239 kb on - strand at 764.239 kb on - strand at 764.239 kb on - strand at 764.239 kb on - strand at 764.239 kb on - strand at 764.239 kb on - strand at 764.239 kb on - strand at 764.239 kb on - strand at 764.239 kb on - strand at 764.243 kb on - strand at 764.243 kb on - strand at 764.243 kb on - strand at 764.243 kb on - strand at 764.243 kb on - strand at 764.243 kb on - strand at 764.243 kb on - strand at 764.245 kb on + strand at 764.257 kb on + strand at 764.332 kb on + strand at 764.333 kb on - strand at 764.333 kb on - strand at 764.333 kb on - strand at 764.335 kb on - strand at 764.335 kb on - strand at 764.744 kb on + strand, within PS417_03335 at 764.744 kb on + strand, within PS417_03335 at 764.916 kb on - strand, within PS417_03335 at 764.981 kb on + strand, within PS417_03335 at 764.982 kb on - strand, within PS417_03335
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.002 mg/ml remove 761,821 + PS417_03325 0.58 +1.0 761,821 + PS417_03325 0.58 -0.3 761,822 - PS417_03325 0.58 +0.1 761,822 - PS417_03325 0.58 +0.7 762,013 + PS417_03325 0.69 -0.9 762,086 - PS417_03325 0.73 +0.0 762,113 - PS417_03325 0.75 +0.4 762,510 + +0.1 762,634 + +0.1 762,656 + +1.5 762,727 - -0.9 762,727 - +0.7 762,852 + -0.4 762,955 + PS417_03330 0.11 -0.7 762,956 - PS417_03330 0.11 -0.5 762,956 - PS417_03330 0.11 -1.8 762,956 - PS417_03330 0.11 -0.6 762,956 - PS417_03330 0.11 -0.0 762,997 + PS417_03330 0.14 +1.8 763,025 - PS417_03330 0.16 -0.2 763,054 + PS417_03330 0.18 +0.9 763,055 - PS417_03330 0.18 -0.1 763,055 - PS417_03330 0.18 -0.4 763,117 + PS417_03330 0.22 +0.7 763,138 + PS417_03330 0.24 +1.7 763,138 + PS417_03330 0.24 -0.1 763,138 + PS417_03330 0.24 -0.0 763,138 + PS417_03330 0.24 +0.1 763,138 + PS417_03330 0.24 +0.5 763,139 - PS417_03330 0.24 -0.3 763,139 - PS417_03330 0.24 +0.8 763,178 + PS417_03330 0.26 -0.5 763,179 - PS417_03330 0.26 -0.7 763,179 - PS417_03330 0.26 +2.8 763,179 - PS417_03330 0.26 +1.0 763,768 + PS417_03330 0.68 -0.5 763,769 - PS417_03330 0.68 +0.2 763,987 + PS417_03330 0.83 -0.1 764,236 + -0.1 764,236 + -0.2 764,236 + -2.3 764,237 - -0.4 764,237 - +0.1 764,237 - -0.9 764,238 + +1.4 764,238 + +1.0 764,238 + +1.6 764,238 + -0.4 764,239 - -0.3 764,239 - -0.3 764,239 - -0.2 764,239 - +0.3 764,239 - +0.7 764,239 - -0.7 764,239 - +2.0 764,239 - +1.0 764,239 - -0.3 764,243 - +0.1 764,243 - -1.1 764,243 - +1.5 764,243 - -0.1 764,243 - +0.2 764,243 - -1.2 764,243 - +0.5 764,245 + -0.4 764,257 + -1.5 764,332 + -0.2 764,333 - +0.6 764,333 - -1.6 764,333 - +0.7 764,335 - -0.4 764,335 - +0.9 764,744 + PS417_03335 0.26 -0.2 764,744 + PS417_03335 0.26 -0.3 764,916 - PS417_03335 0.39 +0.8 764,981 + PS417_03335 0.44 -1.4 764,982 - PS417_03335 0.44 -0.3
Or see this region's nucleotide sequence