Experiment: Phosphomycin 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_26665 and PS417_26670 are separated by 46 nucleotides PS417_26670 and PS417_26675 are separated by 239 nucleotides PS417_26675 and PS417_26680 are separated by 77 nucleotides
PS417_26665: PS417_26665 - chemotaxis protein CheY, at 5,766,156 to 5,766,521
_26665
PS417_26670: PS417_26670 - pilus assembly protein PilG, at 5,766,568 to 5,766,975
_26670
PS417_26675: PS417_26675 - glutathione synthetase, at 5,767,215 to 5,768,168
_26675
PS417_26680: PS417_26680 - energy transducer TonB, at 5,768,246 to 5,769,151
_26680
Position (kb)
5767
5768
5769 Strain fitness (log2 ratio)
-2
-1
0
1 at 5766.535 kb on - strand at 5766.535 kb on - strand at 5766.538 kb on + strand at 5766.538 kb on + strand at 5766.538 kb on + strand at 5766.538 kb on + strand at 5766.538 kb on + strand at 5766.539 kb on - strand at 5766.539 kb on - strand at 5766.539 kb on - strand at 5766.539 kb on - strand at 5766.539 kb on - strand at 5766.539 kb on - strand at 5766.539 kb on - strand at 5766.606 kb on - strand at 5766.606 kb on - strand at 5767.017 kb on + strand at 5767.018 kb on - strand at 5767.018 kb on - strand at 5767.092 kb on - strand at 5767.184 kb on - strand at 5767.193 kb on - strand at 5768.169 kb on + strand at 5768.171 kb on + strand at 5768.171 kb on + strand at 5768.171 kb on + strand at 5768.171 kb on + strand at 5768.171 kb on + strand at 5768.172 kb on - strand at 5768.172 kb on - strand at 5768.172 kb on - strand at 5768.172 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.002 mg/ml remove 5,766,535 - +0.6 5,766,535 - +0.3 5,766,538 + +1.0 5,766,538 + -0.4 5,766,538 + -0.0 5,766,538 + +0.8 5,766,538 + -1.2 5,766,539 - -1.3 5,766,539 - +1.2 5,766,539 - -0.3 5,766,539 - -1.7 5,766,539 - +0.1 5,766,539 - -0.2 5,766,539 - -0.3 5,766,606 - +0.2 5,766,606 - -0.6 5,767,017 + +0.5 5,767,018 - -0.0 5,767,018 - -0.6 5,767,092 - -1.3 5,767,184 - -0.3 5,767,193 - -2.5 5,768,169 + -0.3 5,768,171 + +0.2 5,768,171 + +0.7 5,768,171 + +0.6 5,768,171 + +0.1 5,768,171 + +1.2 5,768,172 - -2.5 5,768,172 - -0.2 5,768,172 - +1.4 5,768,172 - +0.1
Or see this region's nucleotide sequence