Experiment: Phosphomycin 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_18555 and PS417_18560 are separated by 244 nucleotides PS417_18560 and PS417_18565 are separated by 64 nucleotides PS417_18565 and PS417_18570 are separated by 141 nucleotides
PS417_18555: PS417_18555 - acetyl-CoA carboxylase subunit beta, at 4,028,739 to 4,029,659
_18555
PS417_18560: PS417_18560 - N-(5'-phosphoribosyl)anthranilate isomerase, at 4,029,904 to 4,030,536
_18560
PS417_18565: PS417_18565 - pseudouridine synthase, at 4,030,601 to 4,031,425
_18565
PS417_18570: PS417_18570 - peptidoglycan-binding protein, at 4,031,567 to 4,034,128
_18570
Position (kb)
4030
4031
4032 Strain fitness (log2 ratio)
-1
0
1
2 at 4029.724 kb on - strand at 4029.865 kb on - strand at 4029.875 kb on - strand at 4029.955 kb on - strand at 4030.010 kb on + strand, within PS417_18560 at 4030.148 kb on + strand, within PS417_18560 at 4030.148 kb on + strand, within PS417_18560 at 4030.148 kb on + strand, within PS417_18560 at 4030.148 kb on + strand, within PS417_18560 at 4030.149 kb on - strand, within PS417_18560 at 4030.149 kb on - strand, within PS417_18560 at 4030.439 kb on + strand, within PS417_18560 at 4030.439 kb on + strand, within PS417_18560 at 4030.440 kb on - strand, within PS417_18560 at 4030.440 kb on - strand, within PS417_18560 at 4030.440 kb on - strand, within PS417_18560 at 4030.495 kb on + strand at 4030.826 kb on - strand, within PS417_18565 at 4031.441 kb on - strand at 4031.444 kb on + strand at 4031.444 kb on + strand at 4031.445 kb on - strand at 4031.445 kb on - strand at 4031.446 kb on + strand at 4031.679 kb on + strand at 4031.679 kb on + strand at 4031.680 kb on - strand at 4031.680 kb on - strand at 4031.680 kb on - strand at 4031.680 kb on - strand at 4032.258 kb on + strand, within PS417_18570
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.002 mg/ml remove 4,029,724 - +2.1 4,029,865 - +0.3 4,029,875 - -1.1 4,029,955 - -1.5 4,030,010 + PS417_18560 0.17 +0.5 4,030,148 + PS417_18560 0.39 -0.4 4,030,148 + PS417_18560 0.39 +0.4 4,030,148 + PS417_18560 0.39 -0.6 4,030,148 + PS417_18560 0.39 +0.8 4,030,149 - PS417_18560 0.39 +0.2 4,030,149 - PS417_18560 0.39 -0.6 4,030,439 + PS417_18560 0.85 +0.1 4,030,439 + PS417_18560 0.85 -0.0 4,030,440 - PS417_18560 0.85 -0.7 4,030,440 - PS417_18560 0.85 -0.6 4,030,440 - PS417_18560 0.85 -1.4 4,030,495 + +0.9 4,030,826 - PS417_18565 0.27 -0.5 4,031,441 - +0.2 4,031,444 + -0.8 4,031,444 + -0.9 4,031,445 - -0.4 4,031,445 - -0.9 4,031,446 + -0.8 4,031,679 + -0.2 4,031,679 + -0.3 4,031,680 - +0.1 4,031,680 - -0.2 4,031,680 - +0.6 4,031,680 - -0.0 4,032,258 + PS417_18570 0.27 +0.1
Or see this region's nucleotide sequence