Strain Fitness in Pseudomonas simiae WCS417 around PS417_17305
Experiment: Phosphomycin 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Phosphomycin 0.002 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,779,207 | + | PS417_17300 | 0.76 | -0.3 | |
3,779,373 | + | PS417_17300 | 0.87 | +0.0 | |
3,779,399 | - | PS417_17300 | 0.89 | -0.1 | |
3,779,507 | + | +0.9 | |||
3,779,551 | + | -0.4 | |||
3,779,551 | + | -0.5 | |||
3,779,552 | - | -0.4 | |||
3,779,708 | - | -0.2 | |||
3,779,725 | + | -0.4 | |||
3,779,747 | + | +0.6 | |||
3,779,748 | - | -0.3 | |||
3,779,748 | - | -0.5 | |||
3,779,880 | + | -0.4 | |||
3,779,881 | - | -0.3 | |||
3,779,881 | - | -0.0 | |||
3,779,914 | + | -0.4 | |||
3,779,914 | + | +0.2 | |||
3,779,914 | + | +0.6 | |||
3,779,914 | + | -1.1 | |||
3,779,915 | - | +0.9 | |||
3,779,915 | - | -1.2 | |||
3,779,915 | - | -0.4 | |||
3,779,968 | + | -0.1 | |||
3,779,968 | + | -0.9 | |||
3,779,969 | - | +0.1 | |||
3,779,969 | - | +0.8 | |||
3,780,004 | - | -0.8 | |||
3,780,058 | + | +0.1 | |||
3,780,059 | - | +0.6 | |||
3,780,059 | - | +0.6 | |||
3,780,059 | - | -0.6 | |||
3,780,069 | + | -0.8 | |||
3,780,070 | - | -0.4 | |||
3,780,070 | - | +0.6 | |||
3,780,134 | + | +0.5 | |||
3,780,135 | - | -0.4 | |||
3,780,329 | - | PS417_17305 | 0.85 | -1.5 | |
3,780,476 | - | -0.3 | |||
3,780,483 | + | +0.3 | |||
3,780,773 | - | PS417_17310 | 0.21 | -0.9 | |
3,781,202 | - | PS417_17310 | 0.55 | +0.0 | |
3,781,215 | - | PS417_17310 | 0.56 | -1.6 |
Or see this region's nucleotide sequence