Experiment: Phosphomycin 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_16830 and PS417_16835 overlap by 1 nucleotides PS417_16835 and PS417_16840 overlap by 4 nucleotides
PS417_16830: PS417_16830 - monovalent cation/H+ antiporter subunit A, at 3,670,614 to 3,673,535
_16830
PS417_16835: PS417_16835 - monovalent cation/H+ antiporter subunit C, at 3,673,535 to 3,673,879
_16835
PS417_16840: PS417_16840 - monovalent cation/H+ antiporter subunit D, at 3,673,876 to 3,675,558
_16840
Position (kb)
3673
3674 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3672.765 kb on + strand, within PS417_16830 at 3672.934 kb on - strand at 3673.197 kb on - strand, within PS417_16830 at 3673.206 kb on + strand, within PS417_16830 at 3673.206 kb on + strand at 3673.206 kb on + strand, within PS417_16830 at 3673.207 kb on - strand, within PS417_16830 at 3673.429 kb on + strand at 3673.485 kb on - strand at 3673.508 kb on - strand at 3673.736 kb on + strand, within PS417_16835 at 3673.737 kb on - strand, within PS417_16835 at 3674.032 kb on + strand at 3674.072 kb on - strand, within PS417_16840 at 3674.251 kb on + strand, within PS417_16840 at 3674.252 kb on - strand, within PS417_16840 at 3674.320 kb on + strand, within PS417_16840 at 3674.321 kb on - strand, within PS417_16840 at 3674.374 kb on + strand, within PS417_16840 at 3674.375 kb on - strand, within PS417_16840 at 3674.375 kb on - strand, within PS417_16840 at 3674.432 kb on - strand, within PS417_16840 at 3674.734 kb on + strand, within PS417_16840 at 3674.734 kb on + strand, within PS417_16840 at 3674.735 kb on - strand, within PS417_16840 at 3674.735 kb on - strand, within PS417_16840
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.002 mg/ml remove 3,672,765 + PS417_16830 0.74 +0.6 3,672,934 - +2.2 3,673,197 - PS417_16830 0.88 -0.6 3,673,206 + PS417_16830 0.89 -0.6 3,673,206 + +0.6 3,673,206 + PS417_16830 0.89 -0.4 3,673,207 - PS417_16830 0.89 -0.3 3,673,429 + +0.1 3,673,485 - -0.2 3,673,508 - -1.4 3,673,736 + PS417_16835 0.58 +0.9 3,673,737 - PS417_16835 0.59 -1.4 3,674,032 + -0.1 3,674,072 - PS417_16840 0.12 +0.4 3,674,251 + PS417_16840 0.22 -0.4 3,674,252 - PS417_16840 0.22 +1.3 3,674,320 + PS417_16840 0.26 -0.6 3,674,321 - PS417_16840 0.26 -0.3 3,674,374 + PS417_16840 0.30 -2.3 3,674,375 - PS417_16840 0.30 -2.2 3,674,375 - PS417_16840 0.30 +0.4 3,674,432 - PS417_16840 0.33 -0.0 3,674,734 + PS417_16840 0.51 +1.0 3,674,734 + PS417_16840 0.51 +0.7 3,674,735 - PS417_16840 0.51 +0.2 3,674,735 - PS417_16840 0.51 -1.0
Or see this region's nucleotide sequence