Experiment: Phosphomycin 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_13750 and PS417_13755 are separated by 630 nucleotides PS417_13755 and PS417_13760 are separated by 103 nucleotides PS417_13760 and PS417_13765 are separated by 58 nucleotides
PS417_13750: PS417_13750 - ompetence-damaged protein, at 3,020,202 to 3,020,678
_13750
PS417_13755: PS417_13755 - oxidoreductase, at 3,021,309 to 3,022,058
_13755
PS417_13760: PS417_13760 - transcriptional regulator, at 3,022,162 to 3,022,521
_13760
PS417_13765: PS417_13765 - histidine kinase, at 3,022,580 to 3,024,193
_13765
Position (kb)
3021
3022
3023 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3020.327 kb on + strand, within PS417_13750 at 3020.328 kb on - strand, within PS417_13750 at 3020.328 kb on - strand, within PS417_13750 at 3020.383 kb on + strand, within PS417_13750 at 3020.398 kb on + strand, within PS417_13750 at 3020.399 kb on - strand, within PS417_13750 at 3020.399 kb on - strand, within PS417_13750 at 3020.399 kb on - strand, within PS417_13750 at 3020.402 kb on + strand, within PS417_13750 at 3020.402 kb on + strand at 3020.403 kb on - strand at 3020.500 kb on + strand, within PS417_13750 at 3020.516 kb on - strand, within PS417_13750 at 3020.516 kb on - strand at 3020.539 kb on + strand, within PS417_13750 at 3020.616 kb on - strand at 3020.653 kb on + strand at 3020.654 kb on - strand at 3020.700 kb on - strand at 3020.774 kb on + strand at 3020.775 kb on - strand at 3020.813 kb on - strand at 3020.835 kb on - strand at 3020.851 kb on + strand at 3020.852 kb on - strand at 3020.980 kb on + strand at 3020.980 kb on + strand at 3021.002 kb on + strand at 3021.071 kb on + strand at 3021.079 kb on + strand at 3021.079 kb on + strand at 3021.109 kb on + strand at 3021.109 kb on + strand at 3021.129 kb on - strand at 3021.195 kb on + strand at 3021.196 kb on - strand at 3021.610 kb on + strand, within PS417_13755 at 3021.690 kb on + strand, within PS417_13755 at 3021.952 kb on - strand, within PS417_13755 at 3021.952 kb on - strand, within PS417_13755 at 3022.029 kb on + strand at 3022.029 kb on + strand at 3022.030 kb on - strand at 3022.095 kb on - strand at 3022.134 kb on + strand at 3022.267 kb on + strand, within PS417_13760 at 3022.277 kb on + strand, within PS417_13760 at 3022.394 kb on - strand, within PS417_13760 at 3022.464 kb on + strand, within PS417_13760 at 3022.465 kb on - strand, within PS417_13760 at 3022.675 kb on + strand at 3022.676 kb on - strand at 3022.760 kb on - strand, within PS417_13765 at 3022.780 kb on + strand, within PS417_13765 at 3022.968 kb on - strand, within PS417_13765 at 3022.968 kb on - strand, within PS417_13765
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.002 mg/ml remove 3,020,327 + PS417_13750 0.26 -0.1 3,020,328 - PS417_13750 0.26 -0.9 3,020,328 - PS417_13750 0.26 -1.3 3,020,383 + PS417_13750 0.38 +0.5 3,020,398 + PS417_13750 0.41 +0.2 3,020,399 - PS417_13750 0.41 +0.7 3,020,399 - PS417_13750 0.41 -0.1 3,020,399 - PS417_13750 0.41 -0.3 3,020,402 + PS417_13750 0.42 +0.0 3,020,402 + +1.5 3,020,403 - +1.5 3,020,500 + PS417_13750 0.62 +0.7 3,020,516 - PS417_13750 0.66 +1.5 3,020,516 - +1.5 3,020,539 + PS417_13750 0.71 -1.2 3,020,616 - +1.5 3,020,653 + -1.3 3,020,654 - +1.5 3,020,700 - +1.3 3,020,774 + +0.3 3,020,775 - -0.1 3,020,813 - -1.3 3,020,835 - -0.5 3,020,851 + +0.7 3,020,852 - +0.5 3,020,980 + +0.5 3,020,980 + +1.0 3,021,002 + +0.8 3,021,071 + +0.3 3,021,079 + -0.1 3,021,079 + +0.1 3,021,109 + -2.6 3,021,109 + -0.2 3,021,129 - +1.3 3,021,195 + +0.7 3,021,196 - +3.1 3,021,610 + PS417_13755 0.40 -0.5 3,021,690 + PS417_13755 0.51 -0.1 3,021,952 - PS417_13755 0.86 -0.6 3,021,952 - PS417_13755 0.86 -1.3 3,022,029 + -1.1 3,022,029 + +0.1 3,022,030 - +2.3 3,022,095 - -0.2 3,022,134 + -0.4 3,022,267 + PS417_13760 0.29 -0.3 3,022,277 + PS417_13760 0.32 +0.3 3,022,394 - PS417_13760 0.64 +0.1 3,022,464 + PS417_13760 0.84 +0.1 3,022,465 - PS417_13760 0.84 +0.3 3,022,675 + +0.9 3,022,676 - +1.5 3,022,760 - PS417_13765 0.11 -0.8 3,022,780 + PS417_13765 0.12 -0.1 3,022,968 - PS417_13765 0.24 +0.1 3,022,968 - PS417_13765 0.24 -0.8
Or see this region's nucleotide sequence