Strain Fitness in Pseudomonas simiae WCS417 around PS417_13645
Experiment: Phosphomycin 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Phosphomycin 0.002 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,002,418 | + | PS417_13640 | 0.60 | -0.2 | |
3,002,545 | + | PS417_13640 | 0.73 | +0.0 | |
3,002,730 | + | -0.7 | |||
3,003,034 | - | PS417_13645 | 0.21 | -1.1 | |
3,003,065 | + | PS417_13645 | 0.25 | -0.7 | |
3,003,249 | + | PS417_13645 | 0.44 | -0.6 | |
3,003,598 | + | PS417_13645 | 0.82 | -0.2 | |
3,003,738 | - | -0.2 | |||
3,003,742 | - | -0.4 | |||
3,003,742 | - | -0.1 | |||
3,003,742 | - | -0.4 | |||
3,003,742 | - | +0.6 | |||
3,003,759 | - | -0.2 | |||
3,003,923 | - | PS417_13650 | 0.13 | +0.1 | |
3,003,923 | - | PS417_13650 | 0.13 | -0.2 | |
3,003,969 | + | PS417_13650 | 0.18 | -0.5 | |
3,004,007 | - | PS417_13650 | 0.22 | -0.9 | |
3,004,761 | + | +0.1 | |||
3,004,762 | - | -0.8 |
Or see this region's nucleotide sequence