Experiment: Phosphomycin 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_01205 and PS417_01210 are separated by 179 nucleotides PS417_01210 and PS417_01215 are separated by 56 nucleotides PS417_01215 and PS417_01220 are separated by 28 nucleotides
PS417_01205: PS417_01205 - molecular chaperone Hsp33, at 264,351 to 265,253
_01205
PS417_01210: PS417_01210 - hypothetical protein, at 265,433 to 266,974
_01210
PS417_01215: PS417_01215 - membrane protein, at 267,031 to 267,882
_01215
PS417_01220: PS417_01220 - hypothetical protein, at 267,911 to 268,267
_01220
Position (kb) 265
266
267 Strain fitness (log2 ratio) -2
-1
0
1 at 265.370 kb on + strand at 265.371 kb on - strand at 265.455 kb on + strand at 265.457 kb on + strand at 265.600 kb on + strand, within PS417_01210 at 265.600 kb on + strand, within PS417_01210 at 265.601 kb on - strand, within PS417_01210 at 265.601 kb on - strand, within PS417_01210 at 265.601 kb on - strand, within PS417_01210 at 265.601 kb on - strand, within PS417_01210 at 265.601 kb on - strand, within PS417_01210 at 265.826 kb on + strand, within PS417_01210 at 265.826 kb on + strand, within PS417_01210 at 266.204 kb on + strand, within PS417_01210 at 266.204 kb on + strand, within PS417_01210 at 266.205 kb on - strand, within PS417_01210 at 266.315 kb on + strand, within PS417_01210 at 266.316 kb on - strand, within PS417_01210 at 266.487 kb on - strand, within PS417_01210 at 266.504 kb on + strand, within PS417_01210 at 266.609 kb on + strand, within PS417_01210 at 266.609 kb on + strand, within PS417_01210 at 266.851 kb on + strand at 266.852 kb on - strand at 266.972 kb on + strand at 266.972 kb on + strand at 266.973 kb on - strand at 267.032 kb on + strand at 267.156 kb on + strand, within PS417_01215 at 267.156 kb on + strand, within PS417_01215 at 267.156 kb on + strand, within PS417_01215 at 267.157 kb on - strand, within PS417_01215 at 267.410 kb on + strand, within PS417_01215 at 267.591 kb on - strand, within PS417_01215 at 267.591 kb on - strand, within PS417_01215 at 267.795 kb on - strand, within PS417_01215 at 267.897 kb on - strand at 267.897 kb on - strand at 267.897 kb on - strand at 267.897 kb on - strand at 267.966 kb on + strand, within PS417_01220 at 267.967 kb on - strand, within PS417_01220 at 267.967 kb on - strand, within PS417_01220
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.002 mg/ml remove 265,370 + -1.3 265,371 - -2.3 265,455 + -1.7 265,457 + -0.8 265,600 + PS417_01210 0.11 -1.1 265,600 + PS417_01210 0.11 -2.2 265,601 - PS417_01210 0.11 -1.4 265,601 - PS417_01210 0.11 -1.7 265,601 - PS417_01210 0.11 +0.5 265,601 - PS417_01210 0.11 -1.7 265,601 - PS417_01210 0.11 -1.3 265,826 + PS417_01210 0.25 -2.1 265,826 + PS417_01210 0.25 -1.3 266,204 + PS417_01210 0.50 -1.5 266,204 + PS417_01210 0.50 -2.2 266,205 - PS417_01210 0.50 -2.3 266,315 + PS417_01210 0.57 -0.5 266,316 - PS417_01210 0.57 -0.4 266,487 - PS417_01210 0.68 -1.2 266,504 + PS417_01210 0.69 +0.4 266,609 + PS417_01210 0.76 -0.4 266,609 + PS417_01210 0.76 +1.2 266,851 + +1.2 266,852 - +0.6 266,972 + -0.8 266,972 + +0.3 266,973 - -0.9 267,032 + -0.4 267,156 + PS417_01215 0.15 +0.4 267,156 + PS417_01215 0.15 -0.0 267,156 + PS417_01215 0.15 -0.3 267,157 - PS417_01215 0.15 -1.2 267,410 + PS417_01215 0.44 -0.4 267,591 - PS417_01215 0.66 -0.3 267,591 - PS417_01215 0.66 -0.4 267,795 - PS417_01215 0.90 -1.0 267,897 - -1.5 267,897 - -1.6 267,897 - -0.3 267,897 - -0.4 267,966 + PS417_01220 0.15 +0.2 267,967 - PS417_01220 0.16 -0.2 267,967 - PS417_01220 0.16 -0.4
Or see this region's nucleotide sequence