Experiment: Phosphomycin 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_05560 and PS417_05565 are separated by 305 nucleotides PS417_05565 and PS417_05570 are separated by 299 nucleotides
PS417_05560: PS417_05560 - ABC transporter, at 1,250,721 to 1,251,647
_05560
PS417_05565: PS417_05565 - glycerol-3-phosphate dehydrogenase, at 1,251,953 to 1,253,491
_05565
PS417_05570: PS417_05570 - DeoR faimly transcriptional regulator, at 1,253,791 to 1,254,546
_05570
Position (kb)
1251
1252
1253
1254 Strain fitness (log2 ratio)
-1
0
1
2
3
4
5
6
7 at 1251.386 kb on - strand, within PS417_05560 at 1251.461 kb on - strand, within PS417_05560 at 1251.494 kb on - strand at 1251.494 kb on - strand at 1251.651 kb on + strand at 1251.652 kb on - strand at 1251.652 kb on - strand at 1251.652 kb on - strand at 1251.703 kb on - strand at 1251.703 kb on - strand at 1251.757 kb on + strand at 1251.800 kb on - strand at 1251.807 kb on - strand at 1251.866 kb on + strand at 1251.939 kb on - strand at 1251.943 kb on + strand at 1253.449 kb on - strand at 1253.669 kb on - strand at 1253.669 kb on - strand at 1253.669 kb on - strand at 1253.673 kb on - strand at 1253.673 kb on - strand at 1253.782 kb on - strand at 1253.793 kb on - strand at 1254.306 kb on + strand, within PS417_05570 at 1254.374 kb on + strand, within PS417_05570 at 1254.374 kb on + strand, within PS417_05570 at 1254.375 kb on - strand, within PS417_05570 at 1254.375 kb on - strand, within PS417_05570
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.002 mg/ml remove 1,251,386 - PS417_05560 0.72 +0.1 1,251,461 - PS417_05560 0.80 -0.7 1,251,494 - -0.4 1,251,494 - +0.9 1,251,651 + +1.3 1,251,652 - -0.6 1,251,652 - -0.1 1,251,652 - +0.3 1,251,703 - -0.0 1,251,703 - +0.1 1,251,757 + -0.3 1,251,800 - +0.1 1,251,807 - -0.2 1,251,866 + -0.6 1,251,939 - -0.4 1,251,943 + +0.2 1,253,449 - +7.1 1,253,669 - +1.3 1,253,669 - -0.2 1,253,669 - -0.5 1,253,673 - +0.2 1,253,673 - +0.9 1,253,782 - -0.2 1,253,793 - +1.3 1,254,306 + PS417_05570 0.68 -0.1 1,254,374 + PS417_05570 0.77 -0.8 1,254,374 + PS417_05570 0.77 -0.2 1,254,375 - PS417_05570 0.77 +0.2 1,254,375 - PS417_05570 0.77 -0.8
Or see this region's nucleotide sequence