Strain Fitness in Pseudomonas simiae WCS417 around PS417_04560

Experiment: Phosphomycin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phosphomycin 0.001 mg/ml
1,009,981	+		PS417_04555	0.73	+0.1
1,009,981	+		PS417_04555	0.73	+0.6
1,009,981	+		PS417_04555	0.73	+0.2
1,009,982	-		PS417_04555	0.73	-2.7
1,009,982	-		PS417_04555	0.73	-0.7
1,010,006	+		PS417_04555	0.74	-0.2
1,010,102	+		PS417_04555	0.78	+0.8
1,010,102	+		PS417_04555	0.78	-0.4
1,010,102	+				+3.7
1,010,103	-		PS417_04555	0.78	-0.6
1,010,103	-		PS417_04555	0.78	-0.2
1,010,159	-		PS417_04555	0.80	+0.3
1,010,368	-		PS417_04555	0.87	-0.2
1,010,512	+				-1.8
1,010,513	-				-0.0
1,010,602	+				+1.1
1,010,603	-				+1.4
1,010,603	-				+1.1
1,010,658	+				+0.8
1,010,658	+				-0.3
1,010,658	+				+0.1
1,010,732	+				+0.9
1,010,732	+				-0.4
1,010,732	+				-0.3
1,010,736	-				+1.1
1,010,744	+				-0.1
1,010,744	+				-0.6
1,010,745	-				+0.1
1,010,745	-				+2.1
1,010,773	-				-0.4
1,011,117	+		PS417_04560	0.49	-0.6
1,011,117	+		PS417_04560	0.49	-0.8
1,011,127	+		PS417_04560	0.51	-1.0
1,011,128	-		PS417_04560	0.51	-0.3
1,011,206	+		PS417_04560	0.63	+0.1
1,011,348	+		PS417_04560	0.85	-0.1
1,011,348	+		PS417_04560	0.85	-0.9
1,011,348	+		PS417_04560	0.85	-1.1
1,011,348	+		PS417_04560	0.85	-0.1
1,011,348	+		PS417_04560	0.85	-1.6
1,011,349	-		PS417_04560	0.85	-0.6
1,011,351	-		PS417_04560	0.86	-0.4
1,011,472	+				+0.0
1,011,472	+				-0.9
1,011,472	+				-0.4
1,011,472	+				+0.1
1,011,473	-				-0.2
1,011,491	-				-0.4
1,011,538	-				-1.5
1,011,609	+				-0.2
1,011,609	+				-0.5
1,011,609	+				-0.4
1,011,610	-				+0.1
1,011,610	-				-0.8
1,011,610	-				-0.4
1,011,610	-				-0.4
1,011,610	-				-0.1
1,011,676	+				+0.7
1,011,677	-				-0.0
1,011,677	-				+0.7
1,011,711	+				+1.6
1,011,774	+		PS417_04565	0.18	+0.8
1,011,775	-		PS417_04565	0.18	-0.0
1,011,898	-		PS417_04565	0.34	-0.5
1,011,898	-		PS417_04565	0.34	-0.4
1,011,898	-		PS417_04565	0.34	+0.7
1,011,898	-		PS417_04565	0.34	-0.5
1,012,041	+				-0.2
1,012,041	+		PS417_04565	0.52	-0.2
1,012,182	+		PS417_04565	0.71	-0.0
1,012,183	-		PS417_04565	0.71	-0.1
1,012,329	+		PS417_04565	0.90	+0.3
1,012,330	-		PS417_04565	0.90	-2.0
1,012,330	-		PS417_04565	0.90	+1.4
1,012,440	-				-0.4
1,012,440	-				-0.8