Experiment: Phosphomycin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_25145 and PS417_25155 are separated by 167 nucleotides PS417_25155 and PS417_25160 are separated by 708 nucleotides
PS417_25145: PS417_25145 - hypothetical protein, at 5,452,012 to 5,452,275
_25145
PS417_25155: PS417_25155 - hypothetical protein, at 5,452,443 to 5,452,703
_25155
PS417_25160: PS417_25160 - hypothetical protein, at 5,453,412 to 5,453,945
_25160
Position (kb)
5452
5453 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5451.621 kb on + strand at 5451.662 kb on - strand at 5451.765 kb on + strand at 5451.767 kb on + strand at 5451.767 kb on + strand at 5451.767 kb on + strand at 5451.768 kb on - strand at 5451.768 kb on - strand at 5451.768 kb on - strand at 5451.768 kb on - strand at 5451.768 kb on - strand at 5451.768 kb on - strand at 5451.768 kb on - strand at 5451.809 kb on + strand at 5451.842 kb on + strand at 5451.842 kb on + strand at 5451.879 kb on + strand at 5451.913 kb on + strand at 5451.913 kb on + strand at 5452.087 kb on - strand, within PS417_25145 at 5452.115 kb on + strand, within PS417_25145 at 5452.289 kb on + strand at 5452.357 kb on - strand at 5452.377 kb on + strand at 5452.378 kb on - strand at 5452.518 kb on - strand, within PS417_25155 at 5452.518 kb on - strand, within PS417_25155 at 5452.694 kb on - strand at 5452.795 kb on + strand at 5452.868 kb on + strand at 5452.994 kb on + strand at 5452.995 kb on - strand at 5453.145 kb on + strand at 5453.279 kb on + strand at 5453.295 kb on + strand at 5453.296 kb on - strand at 5453.302 kb on - strand at 5453.330 kb on - strand at 5453.475 kb on + strand, within PS417_25160 at 5453.488 kb on + strand, within PS417_25160 at 5453.552 kb on + strand, within PS417_25160 at 5453.618 kb on + strand, within PS417_25160 at 5453.618 kb on + strand, within PS417_25160 at 5453.646 kb on + strand, within PS417_25160 at 5453.672 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.001 mg/ml remove 5,451,621 + -0.1 5,451,662 - -0.1 5,451,765 + -0.3 5,451,767 + +0.4 5,451,767 + +2.5 5,451,767 + +0.0 5,451,768 - -0.4 5,451,768 - +0.7 5,451,768 - +1.3 5,451,768 - -0.3 5,451,768 - -1.8 5,451,768 - -0.2 5,451,768 - -0.5 5,451,809 + +0.3 5,451,842 + -0.4 5,451,842 + -0.3 5,451,879 + -0.1 5,451,913 + -0.6 5,451,913 + +0.6 5,452,087 - PS417_25145 0.28 -0.3 5,452,115 + PS417_25145 0.39 +0.0 5,452,289 + +0.2 5,452,357 - -1.4 5,452,377 + -1.2 5,452,378 - +0.7 5,452,518 - PS417_25155 0.29 -1.7 5,452,518 - PS417_25155 0.29 -1.1 5,452,694 - +0.4 5,452,795 + -0.2 5,452,868 + +0.8 5,452,994 + -0.4 5,452,995 - +0.7 5,453,145 + -0.4 5,453,279 + +0.8 5,453,295 + -0.3 5,453,296 - -1.3 5,453,302 - +0.5 5,453,330 - -0.5 5,453,475 + PS417_25160 0.12 -0.2 5,453,488 + PS417_25160 0.14 -0.3 5,453,552 + PS417_25160 0.26 -1.1 5,453,618 + PS417_25160 0.39 +0.2 5,453,618 + PS417_25160 0.39 -0.5 5,453,646 + PS417_25160 0.44 -0.5 5,453,672 - +2.3
Or see this region's nucleotide sequence