Experiment: Phosphomycin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_23915 and PS417_23920 are separated by 224 nucleotides PS417_23920 and PS417_23925 are separated by 105 nucleotides
PS417_23915: PS417_23915 - pantoate--beta-alanine ligase, at 5,175,340 to 5,176,191
_23915
PS417_23920: PS417_23920 - glucose-6-phosphate isomerase, at 5,176,416 to 5,178,080
_23920
PS417_23925: PS417_23925 - acetyl-CoA synthetase, at 5,178,186 to 5,180,123
_23925
Position (kb) 5176
5177
5178
5179 Strain fitness (log2 ratio) -1
0
1
2
3 at 5175.550 kb on + strand, within PS417_23915 at 5175.634 kb on + strand, within PS417_23915 at 5175.797 kb on - strand, within PS417_23915 at 5175.872 kb on + strand, within PS417_23915 at 5176.223 kb on + strand at 5176.276 kb on + strand at 5176.276 kb on + strand at 5176.288 kb on - strand at 5176.288 kb on - strand at 5176.298 kb on + strand at 5176.368 kb on + strand at 5176.379 kb on + strand at 5176.379 kb on + strand at 5176.397 kb on + strand at 5176.939 kb on - strand at 5178.054 kb on + strand at 5178.151 kb on - strand at 5178.255 kb on + strand at 5178.255 kb on + strand at 5178.255 kb on + strand at 5178.256 kb on - strand at 5178.256 kb on - strand at 5178.257 kb on + strand at 5178.258 kb on - strand at 5178.293 kb on + strand at 5178.417 kb on + strand, within PS417_23925 at 5178.417 kb on + strand at 5178.418 kb on - strand, within PS417_23925 at 5178.594 kb on + strand, within PS417_23925 at 5178.594 kb on + strand, within PS417_23925 at 5178.594 kb on + strand, within PS417_23925 at 5178.595 kb on - strand, within PS417_23925 at 5178.595 kb on - strand, within PS417_23925 at 5178.595 kb on - strand, within PS417_23925 at 5178.595 kb on - strand, within PS417_23925 at 5178.705 kb on - strand, within PS417_23925 at 5178.776 kb on + strand at 5178.776 kb on + strand, within PS417_23925 at 5178.776 kb on + strand, within PS417_23925 at 5178.777 kb on - strand, within PS417_23925 at 5178.885 kb on + strand, within PS417_23925 at 5178.885 kb on + strand, within PS417_23925 at 5178.963 kb on + strand at 5178.963 kb on + strand, within PS417_23925 at 5178.964 kb on - strand, within PS417_23925 at 5178.964 kb on - strand, within PS417_23925 at 5178.964 kb on - strand, within PS417_23925 at 5179.047 kb on + strand, within PS417_23925
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.001 mg/ml remove 5,175,550 + PS417_23915 0.25 +0.2 5,175,634 + PS417_23915 0.35 +1.2 5,175,797 - PS417_23915 0.54 +0.4 5,175,872 + PS417_23915 0.62 +0.6 5,176,223 + +0.6 5,176,276 + -0.6 5,176,276 + -0.4 5,176,288 - -0.3 5,176,288 - +1.9 5,176,298 + -0.7 5,176,368 + +0.9 5,176,379 + -1.2 5,176,379 + +0.1 5,176,397 + -0.4 5,176,939 - +3.2 5,178,054 + -0.4 5,178,151 - +0.6 5,178,255 + +0.8 5,178,255 + -0.5 5,178,255 + +0.3 5,178,256 - +0.0 5,178,256 - +0.3 5,178,257 + +0.4 5,178,258 - +0.6 5,178,293 + +0.6 5,178,417 + PS417_23925 0.12 +0.9 5,178,417 + +0.9 5,178,418 - PS417_23925 0.12 +0.5 5,178,594 + PS417_23925 0.21 -0.7 5,178,594 + PS417_23925 0.21 +1.2 5,178,594 + PS417_23925 0.21 +0.9 5,178,595 - PS417_23925 0.21 +0.4 5,178,595 - PS417_23925 0.21 -0.6 5,178,595 - PS417_23925 0.21 -0.6 5,178,595 - PS417_23925 0.21 +0.3 5,178,705 - PS417_23925 0.27 +0.0 5,178,776 + +0.6 5,178,776 + PS417_23925 0.30 +0.5 5,178,776 + PS417_23925 0.30 -0.2 5,178,777 - PS417_23925 0.30 -0.6 5,178,885 + PS417_23925 0.36 -0.1 5,178,885 + PS417_23925 0.36 +1.0 5,178,963 + +3.2 5,178,963 + PS417_23925 0.40 -0.8 5,178,964 - PS417_23925 0.40 +2.4 5,178,964 - PS417_23925 0.40 -1.3 5,178,964 - PS417_23925 0.40 -0.2 5,179,047 + PS417_23925 0.44 -1.1
Or see this region's nucleotide sequence