Experiment: Phosphomycin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_13145 and PS417_13150 are separated by 53 nucleotides PS417_13150 and PS417_13155 are separated by 125 nucleotides PS417_13155 and PS417_13160 are separated by 63 nucleotides PS417_13160 and PS417_13165 are separated by 27 nucleotides
PS417_13145: PS417_13145 - 50S ribosomal protein L21, at 2,872,554 to 2,873,033
_13145
PS417_13150: PS417_13150 - TetR family transcriptional regulator, at 2,873,087 to 2,873,650
_13150
PS417_13155: PS417_13155 - phosphatidylserine synthase, at 2,873,776 to 2,875,119
_13155
PS417_13160: PS417_13160 - iron transporter, at 2,875,183 to 2,876,001
_13160
PS417_13165: PS417_13165 - peroxidase, at 2,876,029 to 2,877,333
_13165
Position (kb)
2873
2874
2875
2876 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2872.811 kb on - strand, within PS417_13145 at 2873.013 kb on + strand at 2873.054 kb on - strand at 2873.736 kb on - strand at 2873.917 kb on + strand, within PS417_13155 at 2873.917 kb on + strand, within PS417_13155 at 2873.917 kb on + strand, within PS417_13155 at 2873.918 kb on - strand, within PS417_13155 at 2873.918 kb on - strand, within PS417_13155 at 2873.918 kb on - strand, within PS417_13155 at 2873.965 kb on + strand, within PS417_13155 at 2873.965 kb on + strand, within PS417_13155 at 2874.131 kb on - strand at 2874.235 kb on + strand, within PS417_13155 at 2874.236 kb on - strand, within PS417_13155 at 2874.236 kb on - strand at 2874.256 kb on + strand, within PS417_13155 at 2874.829 kb on + strand, within PS417_13155 at 2874.830 kb on - strand, within PS417_13155 at 2874.863 kb on - strand, within PS417_13155 at 2875.117 kb on + strand at 2875.184 kb on + strand at 2875.185 kb on - strand at 2875.448 kb on + strand, within PS417_13160 at 2875.531 kb on + strand, within PS417_13160 at 2875.531 kb on + strand, within PS417_13160 at 2875.532 kb on - strand, within PS417_13160 at 2875.629 kb on + strand, within PS417_13160 at 2875.648 kb on + strand, within PS417_13160 at 2875.648 kb on + strand at 2875.653 kb on - strand, within PS417_13160 at 2875.653 kb on - strand, within PS417_13160 at 2875.775 kb on + strand at 2875.775 kb on + strand, within PS417_13160 at 2875.775 kb on + strand, within PS417_13160 at 2876.030 kb on + strand at 2876.031 kb on - strand at 2876.031 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.001 mg/ml remove 2,872,811 - PS417_13145 0.54 -0.8 2,873,013 + -0.1 2,873,054 - -1.8 2,873,736 - +1.2 2,873,917 + PS417_13155 0.10 -0.2 2,873,917 + PS417_13155 0.10 -1.1 2,873,917 + PS417_13155 0.10 -0.8 2,873,918 - PS417_13155 0.11 -1.1 2,873,918 - PS417_13155 0.11 -2.0 2,873,918 - PS417_13155 0.11 -1.1 2,873,965 + PS417_13155 0.14 +0.0 2,873,965 + PS417_13155 0.14 -0.3 2,874,131 - +0.7 2,874,235 + PS417_13155 0.34 +0.9 2,874,236 - PS417_13155 0.34 -1.0 2,874,236 - +1.7 2,874,256 + PS417_13155 0.36 -1.6 2,874,829 + PS417_13155 0.78 -0.3 2,874,830 - PS417_13155 0.78 +0.1 2,874,863 - PS417_13155 0.81 -0.3 2,875,117 + +0.9 2,875,184 + -0.2 2,875,185 - -1.9 2,875,448 + PS417_13160 0.32 -1.9 2,875,531 + PS417_13160 0.42 -0.2 2,875,531 + PS417_13160 0.42 +1.3 2,875,532 - PS417_13160 0.43 -0.5 2,875,629 + PS417_13160 0.54 +0.1 2,875,648 + PS417_13160 0.57 -0.3 2,875,648 + +1.1 2,875,653 - PS417_13160 0.57 +0.2 2,875,653 - PS417_13160 0.57 -0.6 2,875,775 + +3.3 2,875,775 + PS417_13160 0.72 +0.3 2,875,775 + PS417_13160 0.72 +0.6 2,876,030 + +0.2 2,876,031 - +0.4 2,876,031 - -0.3
Or see this region's nucleotide sequence