Strain Fitness in Pseudomonas simiae WCS417 around PS417_10825
Experiment: Phosphomycin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Phosphomycin 0.001 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,313,572 | - | PS417_10820 | 0.62 | +1.8 | |
| 2,313,675 | - | PS417_10820 | 0.68 | +1.3 | |
| 2,313,781 | + | PS417_10820 | 0.73 | -0.1 | |
| 2,313,827 | + | PS417_10820 | 0.75 | +0.2 | |
| 2,313,868 | - | PS417_10820 | 0.77 | -0.6 | |
| 2,313,888 | - | PS417_10820 | 0.78 | +0.9 | |
| 2,313,888 | - | PS417_10820 | 0.78 | +0.8 | |
| 2,314,106 | + | PS417_10820 | 0.89 | -0.3 | |
| 2,314,398 | + | +0.4 | |||
| 2,314,795 | + | PS417_10825 | 0.34 | -0.4 | |
| 2,314,796 | - | PS417_10825 | 0.34 | -0.4 | |
| 2,314,796 | - | PS417_10825 | 0.34 | -1.1 | |
| 2,314,829 | - | PS417_10825 | 0.37 | -0.3 | |
| 2,314,829 | - | PS417_10825 | 0.37 | -0.5 | |
| 2,314,996 | + | PS417_10825 | 0.56 | -0.3 | |
| 2,315,012 | - | PS417_10825 | 0.58 | -1.2 | |
| 2,315,399 | + | +0.1 | |||
| 2,315,399 | + | -0.3 |
Or see this region's nucleotide sequence