Strain Fitness in Pseudomonas simiae WCS417 around PS417_05580

Experiment: Phosphomycin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phosphomycin 0.001 mg/ml
1,255,243	+		PS417_05575	0.41	+3.4
1,255,243	+		PS417_05575	0.41	+1.4
1,255,301	+		PS417_05575	0.45	+2.5
1,255,302	-		PS417_05575	0.45	+2.7
1,255,302	-				+1.1
1,255,577	-		PS417_05575	0.63	+1.5
1,255,720	+		PS417_05575	0.72	+2.4
1,255,720	+		PS417_05575	0.72	+1.9
1,255,720	+		PS417_05575	0.72	+2.4
1,255,721	-		PS417_05575	0.72	+0.6
1,255,756	+		PS417_05575	0.75	+1.5
1,255,832	-		PS417_05575	0.80	+1.3
1,255,832	-		PS417_05575	0.80	-0.5
1,256,110	+				+1.9
1,256,111	-				+0.3
1,256,117	+				+0.9
1,256,265	+				+0.1
1,256,265	+				+1.7
1,256,265	+				+1.1
1,256,266	-				+4.5
1,256,266	-				+4.0
1,256,266	-				+4.8
1,256,266	-				+1.5
1,256,266	-				+5.1
1,256,375	+		PS417_05580	0.19	-0.5
1,256,376	-		PS417_05580	0.19	+3.1
1,256,650	+		PS417_05580	0.51	+1.2
1,256,651	-		PS417_05580	0.51	+1.9
1,256,654	+		PS417_05580	0.51	+1.6
1,256,654	+		PS417_05580	0.51	+0.4
1,256,655	-		PS417_05580	0.51	+1.4
1,256,750	-		PS417_05580	0.62	+0.4
1,256,797	+		PS417_05580	0.68	+0.7
1,256,797	+		PS417_05580	0.68	+1.1
1,256,797	+				+2.1
1,256,797	+		PS417_05580	0.68	+0.7
1,256,797	+		PS417_05580	0.68	+0.9
1,256,797	+		PS417_05580	0.68	+2.0
1,256,797	+		PS417_05580	0.68	+1.7
1,256,797	+		PS417_05580	0.68	+0.9
1,256,798	-		PS417_05580	0.68	-0.2
1,256,798	-		PS417_05580	0.68	+0.3
1,256,798	-		PS417_05580	0.68	-0.0
1,256,847	-		PS417_05580	0.74	-0.2
1,256,861	+		PS417_05580	0.75	+1.5
1,256,893	+		PS417_05580	0.79	+0.9
1,256,928	-		PS417_05580	0.83	+0.3
1,257,167	+				-0.9
1,257,196	-				-0.2
1,257,196	-				+2.1
1,257,201	-				+1.1
1,257,218	+				+1.4
1,257,219	-				+1.2
1,257,277	-				+0.2
1,257,323	-				+1.4
1,257,323	-				+0.9
1,257,337	+				+0.5
1,257,456	+		PS417_05585	0.12	+0.2
1,257,484	-		PS417_05585	0.18	-0.6
1,257,484	-		PS417_05585	0.18	+0.3
1,257,833	+				+0.7
1,257,833	+				+0.2
1,257,929	+				-0.4
1,258,009	+				-0.8
1,258,010	-				-0.0
1,258,010	-				-0.3