Experiment: Aluminum chloride 4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_17350 and PS417_17355 are separated by 257 nucleotides PS417_17355 and PS417_17360 are separated by 232 nucleotides
PS417_17350: PS417_17350 - copper resistance protein CopD, at 3,789,977 to 3,790,834
_17350
PS417_17355: PS417_17355 - porin, at 3,791,092 to 3,792,354
_17355
PS417_17360: PS417_17360 - D-galacturonate dehydrogenase (EC 1.1.1.203) (from data) , at 3,792,587 to 3,793,411
_17360
Position (kb)
3791
3792
3793 Strain fitness (log2 ratio)
-1
0
1
2 at 3790.260 kb on + strand, within PS417_17350 at 3790.273 kb on - strand, within PS417_17350 at 3790.404 kb on + strand, within PS417_17350 at 3790.404 kb on + strand, within PS417_17350 at 3790.405 kb on - strand, within PS417_17350 at 3790.822 kb on + strand at 3790.862 kb on - strand at 3790.988 kb on - strand at 3791.064 kb on + strand at 3791.157 kb on + strand at 3791.791 kb on + strand, within PS417_17355 at 3791.791 kb on + strand, within PS417_17355 at 3791.792 kb on - strand, within PS417_17355 at 3791.944 kb on + strand, within PS417_17355 at 3791.962 kb on + strand, within PS417_17355 at 3791.963 kb on - strand, within PS417_17355 at 3791.963 kb on - strand, within PS417_17355 at 3792.046 kb on + strand, within PS417_17355 at 3792.047 kb on - strand, within PS417_17355 at 3792.047 kb on - strand, within PS417_17355 at 3792.149 kb on - strand, within PS417_17355 at 3792.167 kb on + strand, within PS417_17355 at 3792.167 kb on + strand, within PS417_17355 at 3792.167 kb on + strand, within PS417_17355 at 3792.460 kb on - strand at 3792.541 kb on - strand at 3792.893 kb on - strand, within PS417_17360 at 3792.896 kb on + strand, within PS417_17360 at 3792.896 kb on + strand, within PS417_17360 at 3792.896 kb on + strand, within PS417_17360 at 3792.897 kb on - strand, within PS417_17360 at 3792.897 kb on - strand, within PS417_17360 at 3792.966 kb on - strand, within PS417_17360 at 3792.966 kb on - strand at 3792.966 kb on - strand, within PS417_17360 at 3793.016 kb on + strand, within PS417_17360 at 3793.016 kb on + strand, within PS417_17360 at 3793.016 kb on + strand, within PS417_17360 at 3793.016 kb on + strand, within PS417_17360 at 3793.017 kb on - strand, within PS417_17360 at 3793.073 kb on + strand, within PS417_17360 at 3793.194 kb on - strand, within PS417_17360 at 3793.223 kb on + strand, within PS417_17360
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 4 mM remove 3,790,260 + PS417_17350 0.33 +1.9 3,790,273 - PS417_17350 0.34 +1.9 3,790,404 + PS417_17350 0.50 +0.1 3,790,404 + PS417_17350 0.50 +0.7 3,790,405 - PS417_17350 0.50 -0.3 3,790,822 + -0.1 3,790,862 - +0.1 3,790,988 - -0.3 3,791,064 + +0.9 3,791,157 + -0.4 3,791,791 + PS417_17355 0.55 +0.4 3,791,791 + PS417_17355 0.55 -0.2 3,791,792 - PS417_17355 0.55 +0.3 3,791,944 + PS417_17355 0.67 +0.9 3,791,962 + PS417_17355 0.69 +0.3 3,791,963 - PS417_17355 0.69 -0.2 3,791,963 - PS417_17355 0.69 +0.6 3,792,046 + PS417_17355 0.76 +0.0 3,792,047 - PS417_17355 0.76 +0.2 3,792,047 - PS417_17355 0.76 +0.3 3,792,149 - PS417_17355 0.84 +0.5 3,792,167 + PS417_17355 0.85 +0.7 3,792,167 + PS417_17355 0.85 +0.6 3,792,167 + PS417_17355 0.85 +0.5 3,792,460 - -0.7 3,792,541 - +0.1 3,792,893 - PS417_17360 0.37 +0.3 3,792,896 + PS417_17360 0.37 +0.9 3,792,896 + PS417_17360 0.37 -0.1 3,792,896 + PS417_17360 0.37 +0.2 3,792,897 - PS417_17360 0.38 -1.1 3,792,897 - PS417_17360 0.38 -0.1 3,792,966 - PS417_17360 0.46 +0.3 3,792,966 - -0.7 3,792,966 - PS417_17360 0.46 +0.8 3,793,016 + PS417_17360 0.52 +0.3 3,793,016 + PS417_17360 0.52 +0.3 3,793,016 + PS417_17360 0.52 -0.4 3,793,016 + PS417_17360 0.52 +0.0 3,793,017 - PS417_17360 0.52 -0.1 3,793,073 + PS417_17360 0.59 -0.2 3,793,194 - PS417_17360 0.74 +0.2 3,793,223 + PS417_17360 0.77 +0.2
Or see this region's nucleotide sequence