Experiment: Aluminum chloride 4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_17135 and PS417_17140 overlap by 31 nucleotides PS417_17140 and PS417_17145 are separated by 113 nucleotides
PS417_17135: PS417_17135 - LysR family transcriptional regulator, at 3,742,078 to 3,742,974
_17135
PS417_17140: PS417_17140 - LysR family transcriptional regulator, at 3,742,944 to 3,743,804
_17140
PS417_17145: PS417_17145 - 2-aminoethylphosphonate--pyruvate aminotransferase, at 3,743,918 to 3,745,027
_17145
Position (kb)
3742
3743
3744 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3741.971 kb on - strand at 3741.982 kb on + strand at 3741.982 kb on + strand at 3742.001 kb on - strand at 3742.483 kb on + strand, within PS417_17135 at 3742.489 kb on + strand, within PS417_17135 at 3742.568 kb on + strand, within PS417_17135 at 3742.568 kb on + strand, within PS417_17135 at 3742.569 kb on - strand, within PS417_17135 at 3742.614 kb on + strand, within PS417_17135 at 3742.614 kb on + strand, within PS417_17135 at 3742.615 kb on - strand, within PS417_17135 at 3743.204 kb on + strand, within PS417_17140 at 3743.204 kb on + strand, within PS417_17140 at 3743.205 kb on - strand, within PS417_17140 at 3743.677 kb on + strand, within PS417_17140 at 3743.677 kb on + strand, within PS417_17140 at 3743.678 kb on - strand, within PS417_17140 at 3743.750 kb on + strand at 3743.824 kb on - strand at 3743.833 kb on - strand at 3743.874 kb on + strand at 3744.608 kb on + strand, within PS417_17145 at 3744.608 kb on + strand, within PS417_17145 at 3744.608 kb on + strand, within PS417_17145 at 3744.609 kb on - strand, within PS417_17145 at 3744.609 kb on - strand, within PS417_17145 at 3744.654 kb on + strand, within PS417_17145 at 3744.654 kb on + strand, within PS417_17145 at 3744.655 kb on - strand, within PS417_17145 at 3744.719 kb on - strand, within PS417_17145 at 3744.726 kb on - strand, within PS417_17145
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 4 mM remove 3,741,971 - -0.4 3,741,982 + +0.9 3,741,982 + -0.4 3,742,001 - -2.1 3,742,483 + PS417_17135 0.45 -0.1 3,742,489 + PS417_17135 0.46 +0.0 3,742,568 + PS417_17135 0.55 -0.3 3,742,568 + PS417_17135 0.55 -0.4 3,742,569 - PS417_17135 0.55 -0.3 3,742,614 + PS417_17135 0.60 +0.2 3,742,614 + PS417_17135 0.60 -0.3 3,742,615 - PS417_17135 0.60 -0.1 3,743,204 + PS417_17140 0.30 +0.5 3,743,204 + PS417_17140 0.30 +0.5 3,743,205 - PS417_17140 0.30 +2.3 3,743,677 + PS417_17140 0.85 -0.4 3,743,677 + PS417_17140 0.85 +1.3 3,743,678 - PS417_17140 0.85 +0.2 3,743,750 + -0.1 3,743,824 - -0.3 3,743,833 - +0.8 3,743,874 + +0.2 3,744,608 + PS417_17145 0.62 +0.7 3,744,608 + PS417_17145 0.62 -0.5 3,744,608 + PS417_17145 0.62 -1.1 3,744,609 - PS417_17145 0.62 +0.3 3,744,609 - PS417_17145 0.62 +1.5 3,744,654 + PS417_17145 0.66 -0.4 3,744,654 + PS417_17145 0.66 +0.3 3,744,655 - PS417_17145 0.66 -1.1 3,744,719 - PS417_17145 0.72 +2.5 3,744,726 - PS417_17145 0.73 +0.3
Or see this region's nucleotide sequence