Strain Fitness in Pseudomonas simiae WCS417 around PS417_28225
Experiment: Cisplatin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.01 mg/ml |
---|---|---|---|---|---|
remove | |||||
6,093,387 | - | -1.1 | |||
6,093,439 | - | +0.4 | |||
6,093,439 | - | +0.0 | |||
6,093,949 | - | PS417_28220 | 0.60 | +0.8 | |
6,093,949 | - | PS417_28220 | 0.60 | +0.6 | |
6,094,075 | + | PS417_28220 | 0.73 | -1.8 | |
6,094,559 | + | PS417_28225 | 0.82 | -0.9 | |
6,094,795 | + | PS417_28230 | 0.19 | -0.4 | |
6,094,795 | + | -1.0 | |||
6,094,796 | - | PS417_28230 | 0.19 | -0.4 | |
6,094,796 | - | PS417_28230 | 0.19 | +1.1 | |
6,095,095 | + | PS417_28230 | 0.54 | +0.0 | |
6,095,096 | - | PS417_28230 | 0.54 | +0.0 | |
6,095,215 | + | PS417_28230 | 0.68 | -0.7 | |
6,095,216 | - | PS417_28230 | 0.68 | +1.4 | |
6,095,477 | + | +0.6 | |||
6,095,478 | - | -4.7 | |||
6,095,533 | - | -1.0 |
Or see this region's nucleotide sequence