Experiment: Cisplatin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_27490 and PS417_27495 are separated by 127 nucleotides PS417_27495 and PS417_27500 are separated by 231 nucleotides PS417_27500 and PS417_27505 are separated by 53 nucleotides PS417_27505 and PS417_27510 are separated by 209 nucleotides
PS417_27490: PS417_27490 - hypothetical protein, at 5,932,904 to 5,933,443
_27490
PS417_27495: PS417_27495 - hypothetical protein, at 5,933,571 to 5,933,816
_27495
PS417_27500: PS417_27500 - peptidylprolyl isomerase, at 5,934,048 to 5,934,725
_27500
PS417_27505: PS417_27505 - transcriptional regulator, at 5,934,779 to 5,935,237
_27505
PS417_27510: PS417_27510 - disulfide bond formation protein B, at 5,935,447 to 5,935,968
_27510
Position (kb) 5934
5935 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5933.279 kb on + strand, within PS417_27490 at 5933.280 kb on - strand, within PS417_27490 at 5933.554 kb on + strand at 5933.555 kb on - strand at 5933.709 kb on - strand, within PS417_27495 at 5933.815 kb on - strand at 5933.815 kb on - strand at 5933.831 kb on + strand at 5933.831 kb on + strand at 5933.832 kb on - strand at 5933.832 kb on - strand at 5933.861 kb on - strand at 5933.889 kb on + strand at 5933.889 kb on + strand at 5933.889 kb on + strand at 5933.889 kb on + strand at 5933.892 kb on + strand at 5933.892 kb on + strand at 5933.892 kb on + strand at 5933.892 kb on + strand at 5933.893 kb on - strand at 5933.893 kb on - strand at 5933.976 kb on - strand at 5933.999 kb on - strand at 5933.999 kb on - strand at 5934.016 kb on + strand at 5934.233 kb on - strand, within PS417_27500 at 5934.489 kb on + strand, within PS417_27500 at 5934.489 kb on + strand, within PS417_27500 at 5934.489 kb on + strand, within PS417_27500 at 5934.490 kb on - strand, within PS417_27500 at 5934.642 kb on + strand, within PS417_27500 at 5934.643 kb on - strand, within PS417_27500 at 5934.707 kb on - strand at 5934.707 kb on - strand at 5934.805 kb on + strand at 5934.805 kb on + strand at 5934.933 kb on - strand, within PS417_27505 at 5934.933 kb on - strand, within PS417_27505 at 5934.933 kb on - strand, within PS417_27505 at 5934.964 kb on - strand, within PS417_27505 at 5934.964 kb on - strand, within PS417_27505 at 5935.059 kb on + strand, within PS417_27505 at 5935.060 kb on - strand, within PS417_27505 at 5935.060 kb on - strand, within PS417_27505 at 5935.254 kb on + strand at 5935.254 kb on + strand at 5935.255 kb on - strand at 5935.360 kb on + strand at 5935.361 kb on - strand at 5935.361 kb on - strand at 5935.407 kb on + strand at 5935.418 kb on - strand at 5935.428 kb on + strand at 5935.649 kb on + strand, within PS417_27510 at 5935.649 kb on + strand, within PS417_27510 at 5935.650 kb on - strand, within PS417_27510 at 5935.650 kb on - strand, within PS417_27510
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.01 mg/ml remove 5,933,279 + PS417_27490 0.69 +1.3 5,933,280 - PS417_27490 0.70 +0.1 5,933,554 + +1.4 5,933,555 - +2.4 5,933,709 - PS417_27495 0.56 +1.5 5,933,815 - +1.8 5,933,815 - +1.5 5,933,831 + +1.3 5,933,831 + +1.4 5,933,832 - +2.3 5,933,832 - +1.6 5,933,861 - +2.5 5,933,889 + +1.1 5,933,889 + +1.6 5,933,889 + +1.0 5,933,889 + +1.4 5,933,892 + +1.3 5,933,892 + +1.2 5,933,892 + +1.0 5,933,892 + +1.5 5,933,893 - +0.6 5,933,893 - +2.2 5,933,976 - +0.6 5,933,999 - -0.2 5,933,999 - -0.8 5,934,016 + +0.6 5,934,233 - PS417_27500 0.27 -0.7 5,934,489 + PS417_27500 0.65 +0.4 5,934,489 + PS417_27500 0.65 +0.8 5,934,489 + PS417_27500 0.65 +0.9 5,934,490 - PS417_27500 0.65 +0.6 5,934,642 + PS417_27500 0.88 +1.6 5,934,643 - PS417_27500 0.88 +0.2 5,934,707 - -0.2 5,934,707 - -0.3 5,934,805 + -1.3 5,934,805 + +0.0 5,934,933 - PS417_27505 0.34 -1.7 5,934,933 - PS417_27505 0.34 +1.6 5,934,933 - PS417_27505 0.34 -0.3 5,934,964 - PS417_27505 0.40 +0.3 5,934,964 - PS417_27505 0.40 +1.6 5,935,059 + PS417_27505 0.61 -0.2 5,935,060 - PS417_27505 0.61 -0.3 5,935,060 - PS417_27505 0.61 -1.9 5,935,254 + -0.5 5,935,254 + -0.1 5,935,255 - +0.0 5,935,360 + +0.4 5,935,361 - +0.1 5,935,361 - -0.6 5,935,407 + -0.0 5,935,418 - -0.7 5,935,428 + -0.3 5,935,649 + PS417_27510 0.39 -1.3 5,935,649 + PS417_27510 0.39 -0.4 5,935,650 - PS417_27510 0.39 -0.4 5,935,650 - PS417_27510 0.39 -0.5
Or see this region's nucleotide sequence