Experiment: Cisplatin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_26795 and PS417_26800 are separated by 129 nucleotides PS417_26800 and PS417_26805 overlap by 4 nucleotides PS417_26805 and PS417_26810 overlap by 4 nucleotides
PS417_26795: PS417_26795 - RNA polymerase sigma 70, at 5,785,797 to 5,786,651
_26795
PS417_26800: PS417_26800 - cell division protein FtsX, at 5,786,781 to 5,787,806
_26800
PS417_26805: PS417_26805 - cell division protein FtsE, at 5,787,803 to 5,788,474
_26805
PS417_26810: PS417_26810 - cell division protein FtsY, at 5,788,471 to 5,789,856
_26810
Position (kb)
5786
5787
5788 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 5786.675 kb on - strand at 5786.742 kb on - strand at 5786.751 kb on - strand at 5786.751 kb on - strand at 5786.751 kb on - strand at 5786.768 kb on - strand at 5786.779 kb on - strand at 5786.783 kb on - strand at 5786.783 kb on - strand at 5786.803 kb on - strand at 5786.803 kb on - strand at 5786.837 kb on - strand at 5786.837 kb on - strand at 5787.005 kb on - strand, within PS417_26800 at 5787.020 kb on - strand, within PS417_26800 at 5787.040 kb on + strand, within PS417_26800 at 5787.040 kb on + strand, within PS417_26800 at 5787.041 kb on - strand, within PS417_26800 at 5787.041 kb on - strand, within PS417_26800 at 5787.041 kb on - strand, within PS417_26800 at 5787.041 kb on - strand, within PS417_26800 at 5787.041 kb on - strand, within PS417_26800 at 5787.041 kb on - strand, within PS417_26800 at 5787.075 kb on + strand, within PS417_26800 at 5787.076 kb on - strand, within PS417_26800 at 5787.116 kb on + strand, within PS417_26800 at 5787.116 kb on + strand, within PS417_26800 at 5787.116 kb on + strand, within PS417_26800 at 5787.117 kb on - strand, within PS417_26800 at 5787.117 kb on - strand, within PS417_26800 at 5787.120 kb on + strand, within PS417_26800 at 5787.132 kb on + strand, within PS417_26800 at 5787.208 kb on - strand, within PS417_26800 at 5787.216 kb on + strand, within PS417_26800 at 5787.216 kb on + strand, within PS417_26800 at 5787.217 kb on - strand, within PS417_26800 at 5787.217 kb on - strand, within PS417_26800 at 5787.217 kb on - strand, within PS417_26800 at 5787.217 kb on - strand, within PS417_26800 at 5787.409 kb on + strand, within PS417_26800 at 5787.409 kb on + strand, within PS417_26800 at 5787.410 kb on - strand, within PS417_26800 at 5787.494 kb on - strand, within PS417_26800 at 5787.546 kb on - strand, within PS417_26800 at 5787.785 kb on + strand at 5787.806 kb on + strand at 5788.376 kb on + strand, within PS417_26805 at 5788.444 kb on - strand at 5788.444 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.01 mg/ml remove 5,786,675 - +1.6 5,786,742 - +5.5 5,786,751 - +0.9 5,786,751 - +0.8 5,786,751 - +0.6 5,786,768 - +1.9 5,786,779 - +0.7 5,786,783 - +1.4 5,786,783 - -0.4 5,786,803 - +0.3 5,786,803 - -1.9 5,786,837 - +0.8 5,786,837 - -0.2 5,787,005 - PS417_26800 0.22 -0.5 5,787,020 - PS417_26800 0.23 -1.6 5,787,040 + PS417_26800 0.25 -2.0 5,787,040 + PS417_26800 0.25 -2.0 5,787,041 - PS417_26800 0.25 -0.8 5,787,041 - PS417_26800 0.25 +0.3 5,787,041 - PS417_26800 0.25 +0.9 5,787,041 - PS417_26800 0.25 -1.0 5,787,041 - PS417_26800 0.25 -0.5 5,787,041 - PS417_26800 0.25 -0.3 5,787,075 + PS417_26800 0.29 -0.4 5,787,076 - PS417_26800 0.29 -0.2 5,787,116 + PS417_26800 0.33 -1.5 5,787,116 + PS417_26800 0.33 -2.4 5,787,116 + PS417_26800 0.33 -0.7 5,787,117 - PS417_26800 0.33 -0.7 5,787,117 - PS417_26800 0.33 -1.6 5,787,120 + PS417_26800 0.33 -3.7 5,787,132 + PS417_26800 0.34 -3.2 5,787,208 - PS417_26800 0.42 -1.1 5,787,216 + PS417_26800 0.42 -2.1 5,787,216 + PS417_26800 0.42 -2.0 5,787,217 - PS417_26800 0.42 -0.1 5,787,217 - PS417_26800 0.42 -1.7 5,787,217 - PS417_26800 0.42 +3.2 5,787,217 - PS417_26800 0.42 -0.9 5,787,409 + PS417_26800 0.61 -1.2 5,787,409 + PS417_26800 0.61 +0.2 5,787,410 - PS417_26800 0.61 +0.1 5,787,494 - PS417_26800 0.69 -1.6 5,787,546 - PS417_26800 0.75 -1.1 5,787,785 + -1.6 5,787,806 + -0.4 5,788,376 + PS417_26805 0.85 -0.6 5,788,444 - -3.1 5,788,444 - -3.2
Or see this region's nucleotide sequence