Experiment: Cisplatin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_25845 and PS417_25850 are separated by 24 nucleotides PS417_25850 and PS417_25855 overlap by 10 nucleotides PS417_25855 and PS417_25860 are separated by 74 nucleotides PS417_25860 and PS417_25865 are separated by 32 nucleotides
PS417_25845: PS417_25845 - 2', 3'-cyclic nucleotide 2'-phosphodiesterase, at 5,581,548 to 5,582,777
_25845
PS417_25850: PS417_25850 - 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase, at 5,582,802 to 5,583,320
_25850
PS417_25855: PS417_25855 - dihydroneopterin aldolase, at 5,583,311 to 5,583,664
_25855
PS417_25860: PS417_25860 - glycerol-3-phosphate acyltransferase, at 5,583,739 to 5,584,308
_25860
PS417_25865: PS417_25865 - UGMP family protein, at 5,584,341 to 5,585,366
_25865
Position (kb) 5583
5584
5585 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 5583.297 kb on + strand at 5583.297 kb on + strand at 5583.302 kb on - strand at 5583.705 kb on + strand at 5583.731 kb on + strand at 5583.731 kb on + strand at 5583.731 kb on + strand at 5583.732 kb on - strand at 5583.735 kb on + strand at 5583.735 kb on + strand at 5583.735 kb on + strand at 5583.736 kb on - strand at 5583.766 kb on + strand at 5583.766 kb on + strand at 5583.864 kb on + strand, within PS417_25860 at 5583.864 kb on + strand, within PS417_25860 at 5583.864 kb on + strand, within PS417_25860 at 5583.864 kb on + strand, within PS417_25860 at 5583.865 kb on - strand, within PS417_25860 at 5583.865 kb on - strand, within PS417_25860 at 5583.865 kb on - strand, within PS417_25860 at 5583.929 kb on + strand, within PS417_25860 at 5583.929 kb on + strand, within PS417_25860 at 5583.929 kb on + strand, within PS417_25860 at 5583.992 kb on + strand, within PS417_25860 at 5583.992 kb on + strand, within PS417_25860 at 5583.993 kb on - strand, within PS417_25860 at 5583.993 kb on - strand, within PS417_25860 at 5583.993 kb on - strand, within PS417_25860 at 5584.024 kb on + strand, within PS417_25860 at 5584.025 kb on - strand, within PS417_25860 at 5584.025 kb on - strand at 5584.084 kb on + strand, within PS417_25860 at 5584.085 kb on - strand, within PS417_25860 at 5584.132 kb on + strand, within PS417_25860 at 5584.133 kb on - strand, within PS417_25860 at 5584.306 kb on + strand at 5584.307 kb on - strand at 5584.311 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.01 mg/ml remove 5,583,297 + -1.6 5,583,297 + -0.4 5,583,302 - +0.6 5,583,705 + -3.4 5,583,731 + -1.9 5,583,731 + -2.6 5,583,731 + -1.7 5,583,732 - -0.0 5,583,735 + -1.1 5,583,735 + +0.1 5,583,735 + -2.2 5,583,736 - -0.5 5,583,766 + -1.1 5,583,766 + -2.8 5,583,864 + PS417_25860 0.22 -1.9 5,583,864 + PS417_25860 0.22 -3.2 5,583,864 + PS417_25860 0.22 -3.7 5,583,864 + PS417_25860 0.22 -0.8 5,583,865 - PS417_25860 0.22 +0.4 5,583,865 - PS417_25860 0.22 +0.1 5,583,865 - PS417_25860 0.22 -0.2 5,583,929 + PS417_25860 0.33 +0.3 5,583,929 + PS417_25860 0.33 -3.8 5,583,929 + PS417_25860 0.33 -2.9 5,583,992 + PS417_25860 0.44 -0.4 5,583,992 + PS417_25860 0.44 -1.0 5,583,993 - PS417_25860 0.45 +0.3 5,583,993 - PS417_25860 0.45 -0.2 5,583,993 - PS417_25860 0.45 +1.6 5,584,024 + PS417_25860 0.50 -0.9 5,584,025 - PS417_25860 0.50 +1.0 5,584,025 - -0.0 5,584,084 + PS417_25860 0.61 -1.5 5,584,085 - PS417_25860 0.61 -0.4 5,584,132 + PS417_25860 0.69 -2.7 5,584,133 - PS417_25860 0.69 +0.5 5,584,306 + -1.8 5,584,307 - +0.6 5,584,311 - -0.0
Or see this region's nucleotide sequence