Experiment: Cisplatin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_24585 and PS417_24590 are separated by 129 nucleotides PS417_24590 and PS417_24595 are separated by 100 nucleotides
PS417_24585: PS417_24585 - AMP nucleosidase, at 5,333,188 to 5,334,651
_24585
PS417_24590: PS417_24590 - acyl-CoA dehydrogenase, at 5,334,781 to 5,336,433
_24590
PS417_24595: PS417_24595 - histidine kinase, at 5,336,534 to 5,338,924
_24595
Position (kb)
5334
5335
5336
5337 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 5334.020 kb on + strand, within PS417_24585 at 5334.021 kb on - strand, within PS417_24585 at 5334.021 kb on - strand, within PS417_24585 at 5334.029 kb on + strand, within PS417_24585 at 5334.030 kb on - strand, within PS417_24585 at 5334.080 kb on + strand, within PS417_24585 at 5334.080 kb on + strand, within PS417_24585 at 5334.164 kb on + strand, within PS417_24585 at 5334.165 kb on - strand, within PS417_24585 at 5334.282 kb on - strand, within PS417_24585 at 5334.368 kb on + strand, within PS417_24585 at 5334.369 kb on - strand, within PS417_24585 at 5334.369 kb on - strand, within PS417_24585 at 5334.372 kb on + strand, within PS417_24585 at 5334.372 kb on + strand, within PS417_24585 at 5334.373 kb on - strand, within PS417_24585 at 5334.408 kb on - strand, within PS417_24585 at 5334.435 kb on - strand, within PS417_24585 at 5334.473 kb on + strand, within PS417_24585 at 5334.473 kb on + strand, within PS417_24585 at 5334.473 kb on + strand, within PS417_24585 at 5334.545 kb on + strand at 5334.545 kb on + strand at 5334.685 kb on + strand at 5334.685 kb on + strand at 5334.848 kb on + strand at 5334.849 kb on - strand at 5335.271 kb on + strand, within PS417_24590 at 5335.661 kb on + strand, within PS417_24590 at 5335.661 kb on + strand, within PS417_24590 at 5335.796 kb on + strand, within PS417_24590 at 5335.938 kb on - strand, within PS417_24590 at 5336.064 kb on - strand, within PS417_24590 at 5336.201 kb on + strand, within PS417_24590 at 5336.360 kb on + strand at 5336.526 kb on + strand at 5336.526 kb on + strand at 5336.701 kb on + strand at 5336.701 kb on + strand at 5336.701 kb on + strand at 5336.793 kb on - strand, within PS417_24595 at 5337.111 kb on + strand, within PS417_24595 at 5337.392 kb on - strand, within PS417_24595
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.01 mg/ml remove 5,334,020 + PS417_24585 0.57 +0.2 5,334,021 - PS417_24585 0.57 -1.1 5,334,021 - PS417_24585 0.57 -3.7 5,334,029 + PS417_24585 0.57 -0.7 5,334,030 - PS417_24585 0.58 -0.1 5,334,080 + PS417_24585 0.61 -1.0 5,334,080 + PS417_24585 0.61 -0.1 5,334,164 + PS417_24585 0.67 +0.3 5,334,165 - PS417_24585 0.67 +0.6 5,334,282 - PS417_24585 0.75 -0.6 5,334,368 + PS417_24585 0.81 -0.1 5,334,369 - PS417_24585 0.81 -2.7 5,334,369 - PS417_24585 0.81 +0.2 5,334,372 + PS417_24585 0.81 -0.7 5,334,372 + PS417_24585 0.81 +0.7 5,334,373 - PS417_24585 0.81 +0.7 5,334,408 - PS417_24585 0.83 +0.8 5,334,435 - PS417_24585 0.85 -0.4 5,334,473 + PS417_24585 0.88 +0.1 5,334,473 + PS417_24585 0.88 +0.3 5,334,473 + PS417_24585 0.88 -1.3 5,334,545 + +0.8 5,334,545 + +0.4 5,334,685 + +0.7 5,334,685 + -0.1 5,334,848 + -2.2 5,334,849 - -0.2 5,335,271 + PS417_24590 0.30 -0.4 5,335,661 + PS417_24590 0.53 -1.7 5,335,661 + PS417_24590 0.53 -0.7 5,335,796 + PS417_24590 0.61 -0.1 5,335,938 - PS417_24590 0.70 -0.9 5,336,064 - PS417_24590 0.78 -0.5 5,336,201 + PS417_24590 0.86 -0.1 5,336,360 + +0.5 5,336,526 + +0.7 5,336,526 + -0.5 5,336,701 + +1.2 5,336,701 + +0.2 5,336,701 + -0.4 5,336,793 - PS417_24595 0.11 +0.3 5,337,111 + PS417_24595 0.24 +0.3 5,337,392 - PS417_24595 0.36 +0.1
Or see this region's nucleotide sequence