Experiment: Cisplatin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_23150 and PS417_23155 overlap by 1 nucleotides PS417_23155 and PS417_23160 are separated by 12 nucleotides PS417_23160 and PS417_23165 are separated by 29 nucleotides PS417_23165 and PS417_23170 are separated by 92 nucleotides PS417_23170 and PS417_23175 are separated by 14 nucleotides
PS417_23150: PS417_23150 - Cro/Cl family transcriptional regulator, at 5,018,517 to 5,019,500
_23150
PS417_23155: PS417_23155 - pilus assembly protein PilW, at 5,019,500 to 5,020,258
_23155
PS417_23160: PS417_23160 - 50S rRNA methyltransferase, at 5,020,271 to 5,021,419
_23160
PS417_23165: PS417_23165 - nucleoside diphosphate kinase, at 5,021,449 to 5,021,874
_23165
PS417_23170: PS417_23170 - FeS assembly protein IscX, at 5,021,967 to 5,022,167
_23170
PS417_23175: PS417_23175 - 2Fe-2S ferredoxin, at 5,022,182 to 5,022,523
_23175
Position (kb)
5020
5021
5022 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 5019.517 kb on - strand at 5019.624 kb on - strand, within PS417_23155 at 5019.624 kb on - strand, within PS417_23155 at 5019.624 kb on - strand, within PS417_23155 at 5019.624 kb on - strand, within PS417_23155 at 5019.624 kb on - strand, within PS417_23155 at 5019.629 kb on - strand, within PS417_23155 at 5019.629 kb on - strand, within PS417_23155 at 5019.629 kb on - strand, within PS417_23155 at 5019.667 kb on - strand, within PS417_23155 at 5019.667 kb on - strand, within PS417_23155 at 5019.667 kb on - strand at 5019.670 kb on - strand, within PS417_23155 at 5019.670 kb on - strand, within PS417_23155 at 5019.688 kb on - strand, within PS417_23155 at 5019.688 kb on - strand, within PS417_23155 at 5019.688 kb on - strand, within PS417_23155 at 5019.982 kb on - strand, within PS417_23155 at 5019.982 kb on - strand, within PS417_23155 at 5020.141 kb on - strand, within PS417_23155 at 5020.141 kb on - strand, within PS417_23155 at 5020.259 kb on - strand at 5020.334 kb on - strand at 5020.336 kb on - strand at 5020.336 kb on - strand at 5020.435 kb on - strand, within PS417_23160 at 5020.615 kb on - strand, within PS417_23160 at 5020.615 kb on - strand, within PS417_23160 at 5020.657 kb on - strand, within PS417_23160 at 5021.439 kb on - strand at 5021.895 kb on - strand at 5021.923 kb on - strand at 5021.925 kb on - strand at 5022.145 kb on - strand, within PS417_23170 at 5022.145 kb on - strand, within PS417_23170 at 5022.159 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.01 mg/ml remove 5,019,517 - +0.3 5,019,624 - PS417_23155 0.16 -1.1 5,019,624 - PS417_23155 0.16 +0.9 5,019,624 - PS417_23155 0.16 +0.6 5,019,624 - PS417_23155 0.16 -0.4 5,019,624 - PS417_23155 0.16 -1.6 5,019,629 - PS417_23155 0.17 -1.2 5,019,629 - PS417_23155 0.17 -1.0 5,019,629 - PS417_23155 0.17 +0.3 5,019,667 - PS417_23155 0.22 -0.9 5,019,667 - PS417_23155 0.22 -0.1 5,019,667 - -0.1 5,019,670 - PS417_23155 0.22 -3.1 5,019,670 - PS417_23155 0.22 -0.2 5,019,688 - PS417_23155 0.25 -1.2 5,019,688 - PS417_23155 0.25 -1.6 5,019,688 - PS417_23155 0.25 -0.3 5,019,982 - PS417_23155 0.64 -0.3 5,019,982 - PS417_23155 0.64 +1.1 5,020,141 - PS417_23155 0.84 -0.7 5,020,141 - PS417_23155 0.84 +0.3 5,020,259 - -1.5 5,020,334 - -0.6 5,020,336 - -1.0 5,020,336 - -0.7 5,020,435 - PS417_23160 0.14 -0.4 5,020,615 - PS417_23160 0.30 -0.2 5,020,615 - PS417_23160 0.30 -1.8 5,020,657 - PS417_23160 0.34 +0.0 5,021,439 - -2.2 5,021,895 - +0.2 5,021,923 - +0.9 5,021,925 - -0.3 5,022,145 - PS417_23170 0.89 +0.4 5,022,145 - PS417_23170 0.89 +0.3 5,022,159 - -0.1
Or see this region's nucleotide sequence