Experiment: Cisplatin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22890 and PS417_22895 are separated by 141 nucleotides PS417_22895 and PS417_22900 are separated by 143 nucleotides PS417_22900 and PS417_22905 are separated by 82 nucleotides
PS417_22890: PS417_22890 - protein-disulfide isomerase, at 4,961,281 to 4,962,012
_22890
PS417_22895: PS417_22895 - tyrosine recombinase XerD, at 4,962,154 to 4,963,050
_22895
PS417_22900: PS417_22900 - cytochrome C oxidase subunit II, at 4,963,194 to 4,963,607
_22900
PS417_22905: PS417_22905 - 50S ribosomal protein L19, at 4,963,690 to 4,964,040
_22905
Position (kb)
4962
4963
4964 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4962.184 kb on - strand at 4962.232 kb on + strand at 4962.474 kb on - strand, within PS417_22895 at 4962.733 kb on + strand, within PS417_22895 at 4962.733 kb on + strand, within PS417_22895 at 4962.734 kb on - strand, within PS417_22895 at 4962.795 kb on - strand, within PS417_22895 at 4962.795 kb on - strand, within PS417_22895 at 4962.848 kb on + strand, within PS417_22895 at 4962.848 kb on + strand, within PS417_22895 at 4963.050 kb on + strand at 4963.050 kb on + strand at 4963.083 kb on - strand at 4963.311 kb on + strand, within PS417_22900 at 4963.311 kb on + strand, within PS417_22900 at 4963.311 kb on + strand, within PS417_22900 at 4963.611 kb on + strand at 4963.611 kb on + strand at 4963.611 kb on + strand at 4963.611 kb on + strand at 4963.611 kb on + strand at 4963.611 kb on + strand at 4963.612 kb on - strand at 4963.612 kb on - strand at 4963.615 kb on + strand at 4963.615 kb on + strand at 4963.615 kb on + strand at 4963.625 kb on + strand at 4963.626 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.01 mg/ml remove 4,962,184 - -2.2 4,962,232 + -1.5 4,962,474 - PS417_22895 0.36 -2.9 4,962,733 + PS417_22895 0.65 -1.7 4,962,733 + PS417_22895 0.65 -1.4 4,962,734 - PS417_22895 0.65 -2.7 4,962,795 - PS417_22895 0.71 -3.1 4,962,795 - PS417_22895 0.71 -2.0 4,962,848 + PS417_22895 0.77 -2.8 4,962,848 + PS417_22895 0.77 -3.0 4,963,050 + -0.2 4,963,050 + -1.0 4,963,083 - +0.1 4,963,311 + PS417_22900 0.28 +0.3 4,963,311 + PS417_22900 0.28 -0.2 4,963,311 + PS417_22900 0.28 -0.2 4,963,611 + -0.1 4,963,611 + +0.4 4,963,611 + -1.0 4,963,611 + +0.8 4,963,611 + +1.2 4,963,611 + -0.0 4,963,612 - -0.3 4,963,612 - -0.0 4,963,615 + +0.9 4,963,615 + -0.2 4,963,615 + +0.0 4,963,625 + -0.3 4,963,626 - +0.2
Or see this region's nucleotide sequence