Strain Fitness in Pseudomonas simiae WCS417 around PS417_22890
Experiment: Cisplatin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.01 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 4,960,399 | - | PS417_22885 | 0.42 | +1.0 | |
| 4,962,184 | - | -2.2 | |||
| 4,962,232 | + | -1.5 | |||
| 4,962,474 | - | PS417_22895 | 0.36 | -2.9 | |
| 4,962,733 | + | PS417_22895 | 0.65 | -1.7 | |
| 4,962,733 | + | PS417_22895 | 0.65 | -1.4 | |
| 4,962,734 | - | PS417_22895 | 0.65 | -2.7 | |
| 4,962,795 | - | PS417_22895 | 0.71 | -3.1 | |
| 4,962,795 | - | PS417_22895 | 0.71 | -2.0 | |
| 4,962,848 | + | PS417_22895 | 0.77 | -2.8 | |
| 4,962,848 | + | PS417_22895 | 0.77 | -3.0 |
Or see this region's nucleotide sequence