Experiment: Cisplatin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_21665 and PS417_21670 are separated by 455 nucleotides PS417_21670 and PS417_21675 are separated by 171 nucleotides
PS417_21665: PS417_21665 - threonine aldolase, at 4,699,153 to 4,700,157
_21665
PS417_21670: PS417_21670 - 6,7-dimethyl-8-ribityllumazine synthase, at 4,700,613 to 4,701,119
_21670
PS417_21675: PS417_21675 - hypothetical protein, at 4,701,291 to 4,702,835
_21675
Position (kb)
4700
4701
4702 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4699.640 kb on + strand, within PS417_21665 at 4699.723 kb on + strand, within PS417_21665 at 4699.892 kb on + strand, within PS417_21665 at 4699.893 kb on - strand, within PS417_21665 at 4699.898 kb on + strand, within PS417_21665 at 4699.898 kb on + strand, within PS417_21665 at 4699.899 kb on - strand, within PS417_21665 at 4699.899 kb on - strand, within PS417_21665 at 4699.903 kb on - strand, within PS417_21665 at 4699.926 kb on - strand, within PS417_21665 at 4700.064 kb on - strand at 4700.191 kb on + strand at 4700.272 kb on + strand at 4700.272 kb on + strand at 4700.272 kb on + strand at 4700.272 kb on + strand at 4700.402 kb on + strand at 4700.402 kb on + strand at 4700.403 kb on - strand at 4700.403 kb on - strand at 4700.492 kb on + strand at 4700.492 kb on + strand at 4700.492 kb on + strand at 4700.525 kb on + strand at 4700.525 kb on + strand at 4700.525 kb on + strand at 4700.526 kb on - strand at 4700.526 kb on - strand at 4700.526 kb on - strand at 4700.540 kb on + strand at 4700.540 kb on + strand at 4700.540 kb on + strand at 4700.540 kb on + strand at 4700.541 kb on - strand at 4700.541 kb on - strand at 4700.541 kb on - strand at 4700.559 kb on + strand at 4700.880 kb on + strand, within PS417_21670 at 4700.881 kb on - strand, within PS417_21670 at 4701.053 kb on + strand, within PS417_21670 at 4701.053 kb on + strand, within PS417_21670 at 4701.053 kb on + strand, within PS417_21670 at 4701.053 kb on + strand, within PS417_21670 at 4701.054 kb on - strand, within PS417_21670 at 4701.198 kb on - strand at 4701.201 kb on + strand at 4701.201 kb on + strand at 4701.201 kb on + strand at 4701.202 kb on - strand at 4701.202 kb on - strand at 4701.202 kb on - strand at 4701.202 kb on - strand at 4701.202 kb on - strand at 4701.234 kb on + strand at 4701.266 kb on - strand at 4701.272 kb on + strand at 4701.273 kb on - strand at 4701.276 kb on + strand at 4701.277 kb on - strand at 4701.277 kb on - strand at 4701.310 kb on - strand at 4701.323 kb on - strand at 4701.331 kb on + strand at 4701.543 kb on + strand, within PS417_21675 at 4701.544 kb on - strand, within PS417_21675 at 4701.544 kb on - strand, within PS417_21675 at 4701.544 kb on - strand, within PS417_21675 at 4701.544 kb on - strand, within PS417_21675 at 4701.544 kb on - strand, within PS417_21675 at 4701.876 kb on - strand, within PS417_21675 at 4701.876 kb on - strand, within PS417_21675 at 4701.912 kb on + strand, within PS417_21675 at 4701.913 kb on - strand, within PS417_21675 at 4701.913 kb on - strand, within PS417_21675 at 4701.937 kb on + strand, within PS417_21675
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.01 mg/ml remove 4,699,640 + PS417_21665 0.48 +0.2 4,699,723 + PS417_21665 0.57 -0.1 4,699,892 + PS417_21665 0.74 -0.4 4,699,893 - PS417_21665 0.74 +0.6 4,699,898 + PS417_21665 0.74 +0.3 4,699,898 + PS417_21665 0.74 -0.5 4,699,899 - PS417_21665 0.74 -0.3 4,699,899 - PS417_21665 0.74 -0.1 4,699,903 - PS417_21665 0.75 -0.9 4,699,926 - PS417_21665 0.77 -0.8 4,700,064 - +0.0 4,700,191 + -0.1 4,700,272 + -0.3 4,700,272 + -0.2 4,700,272 + +0.4 4,700,272 + -0.9 4,700,402 + +0.6 4,700,402 + +0.0 4,700,403 - -0.2 4,700,403 - -1.9 4,700,492 + -1.0 4,700,492 + +0.2 4,700,492 + +0.4 4,700,525 + -1.2 4,700,525 + -0.7 4,700,525 + -0.2 4,700,526 - +0.4 4,700,526 - -0.9 4,700,526 - +0.0 4,700,540 + -0.2 4,700,540 + +0.4 4,700,540 + -0.7 4,700,540 + -0.3 4,700,541 - -0.2 4,700,541 - -0.2 4,700,541 - -0.9 4,700,559 + -0.7 4,700,880 + PS417_21670 0.53 +0.0 4,700,881 - PS417_21670 0.53 -0.5 4,701,053 + PS417_21670 0.87 -1.7 4,701,053 + PS417_21670 0.87 -0.4 4,701,053 + PS417_21670 0.87 -2.3 4,701,053 + PS417_21670 0.87 -0.9 4,701,054 - PS417_21670 0.87 -1.2 4,701,198 - -0.1 4,701,201 + +0.4 4,701,201 + +0.9 4,701,201 + +0.1 4,701,202 - +0.9 4,701,202 - +0.1 4,701,202 - -0.0 4,701,202 - +0.3 4,701,202 - +0.8 4,701,234 + +0.1 4,701,266 - -0.3 4,701,272 + +0.1 4,701,273 - +1.9 4,701,276 + -0.2 4,701,277 - -1.1 4,701,277 - +0.4 4,701,310 - -0.2 4,701,323 - +0.3 4,701,331 + -0.6 4,701,543 + PS417_21675 0.16 +0.1 4,701,544 - PS417_21675 0.16 -0.1 4,701,544 - PS417_21675 0.16 +0.7 4,701,544 - PS417_21675 0.16 -0.0 4,701,544 - PS417_21675 0.16 +1.2 4,701,544 - PS417_21675 0.16 -2.6 4,701,876 - PS417_21675 0.38 +0.5 4,701,876 - PS417_21675 0.38 +0.4 4,701,912 + PS417_21675 0.40 +0.3 4,701,913 - PS417_21675 0.40 +2.0 4,701,913 - PS417_21675 0.40 +0.6 4,701,937 + PS417_21675 0.42 -0.1
Or see this region's nucleotide sequence