Experiment: Cisplatin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_21050 and PS417_21055 are separated by 2 nucleotides PS417_21055 and PS417_21060 are separated by 136 nucleotides
PS417_21050: PS417_21050 - serine acetyltransferase, at 4,579,972 to 4,580,964
_21050
PS417_21055: PS417_21055 - threonyl-tRNA synthetase, at 4,580,967 to 4,581,695
_21055
PS417_21060: PS417_21060 - 2-methylcitrate dehydratase, at 4,581,832 to 4,583,316
_21060
Position (kb)
4580
4581
4582 Strain fitness (log2 ratio)
-2
-1
0
1 at 4580.132 kb on - strand, within PS417_21050 at 4580.179 kb on + strand, within PS417_21050 at 4580.180 kb on - strand, within PS417_21050 at 4580.203 kb on + strand, within PS417_21050 at 4580.203 kb on + strand, within PS417_21050 at 4580.203 kb on + strand, within PS417_21050 at 4580.203 kb on + strand, within PS417_21050 at 4580.203 kb on + strand, within PS417_21050 at 4580.204 kb on - strand, within PS417_21050 at 4580.204 kb on - strand, within PS417_21050 at 4580.204 kb on - strand, within PS417_21050 at 4580.204 kb on - strand, within PS417_21050 at 4580.251 kb on - strand, within PS417_21050 at 4580.251 kb on - strand, within PS417_21050 at 4580.407 kb on + strand, within PS417_21050 at 4580.407 kb on + strand, within PS417_21050 at 4580.408 kb on - strand, within PS417_21050 at 4580.408 kb on - strand, within PS417_21050 at 4580.408 kb on - strand, within PS417_21050 at 4580.498 kb on + strand, within PS417_21050 at 4580.499 kb on - strand, within PS417_21050 at 4580.524 kb on + strand, within PS417_21050 at 4580.525 kb on - strand, within PS417_21050 at 4580.525 kb on - strand, within PS417_21050 at 4580.656 kb on + strand, within PS417_21050 at 4580.657 kb on - strand, within PS417_21050 at 4580.719 kb on - strand, within PS417_21050 at 4581.016 kb on - strand at 4581.077 kb on + strand, within PS417_21055 at 4581.077 kb on + strand, within PS417_21055 at 4581.077 kb on + strand, within PS417_21055 at 4581.241 kb on + strand, within PS417_21055 at 4581.247 kb on + strand, within PS417_21055 at 4581.248 kb on - strand, within PS417_21055 at 4581.801 kb on - strand at 4581.834 kb on - strand at 4582.238 kb on + strand, within PS417_21060 at 4582.238 kb on + strand, within PS417_21060 at 4582.238 kb on + strand, within PS417_21060 at 4582.239 kb on - strand, within PS417_21060 at 4582.239 kb on - strand, within PS417_21060 at 4582.435 kb on + strand, within PS417_21060 at 4582.452 kb on - strand, within PS417_21060 at 4582.452 kb on - strand, within PS417_21060 at 4582.452 kb on - strand, within PS417_21060 at 4582.452 kb on - strand, within PS417_21060 at 4582.452 kb on - strand, within PS417_21060 at 4582.489 kb on - strand, within PS417_21060 at 4582.542 kb on - strand, within PS417_21060
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.01 mg/ml remove 4,580,132 - PS417_21050 0.16 -0.7 4,580,179 + PS417_21050 0.21 -2.5 4,580,180 - PS417_21050 0.21 -0.4 4,580,203 + PS417_21050 0.23 +0.5 4,580,203 + PS417_21050 0.23 -1.4 4,580,203 + PS417_21050 0.23 -0.1 4,580,203 + PS417_21050 0.23 -0.5 4,580,203 + PS417_21050 0.23 +1.3 4,580,204 - PS417_21050 0.23 +0.6 4,580,204 - PS417_21050 0.23 -0.3 4,580,204 - PS417_21050 0.23 -0.2 4,580,204 - PS417_21050 0.23 -1.1 4,580,251 - PS417_21050 0.28 +0.3 4,580,251 - PS417_21050 0.28 +0.4 4,580,407 + PS417_21050 0.44 +0.4 4,580,407 + PS417_21050 0.44 +0.5 4,580,408 - PS417_21050 0.44 -2.5 4,580,408 - PS417_21050 0.44 -0.2 4,580,408 - PS417_21050 0.44 -1.7 4,580,498 + PS417_21050 0.53 +0.3 4,580,499 - PS417_21050 0.53 -0.3 4,580,524 + PS417_21050 0.56 +0.5 4,580,525 - PS417_21050 0.56 +0.3 4,580,525 - PS417_21050 0.56 +0.7 4,580,656 + PS417_21050 0.69 -1.3 4,580,657 - PS417_21050 0.69 +0.2 4,580,719 - PS417_21050 0.75 -0.3 4,581,016 - +0.7 4,581,077 + PS417_21055 0.15 +1.0 4,581,077 + PS417_21055 0.15 +1.2 4,581,077 + PS417_21055 0.15 +1.2 4,581,241 + PS417_21055 0.38 +1.7 4,581,247 + PS417_21055 0.38 -0.1 4,581,248 - PS417_21055 0.39 +0.6 4,581,801 - +0.6 4,581,834 - -0.0 4,582,238 + PS417_21060 0.27 +0.3 4,582,238 + PS417_21060 0.27 +0.6 4,582,238 + PS417_21060 0.27 -2.1 4,582,239 - PS417_21060 0.27 +0.7 4,582,239 - PS417_21060 0.27 +0.9 4,582,435 + PS417_21060 0.41 +0.7 4,582,452 - PS417_21060 0.42 -0.5 4,582,452 - PS417_21060 0.42 +0.4 4,582,452 - PS417_21060 0.42 -0.0 4,582,452 - PS417_21060 0.42 -0.7 4,582,452 - PS417_21060 0.42 -0.1 4,582,489 - PS417_21060 0.44 -1.7 4,582,542 - PS417_21060 0.48 -0.1
Or see this region's nucleotide sequence