Experiment: Cisplatin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_15735 and PS417_15740 overlap by 4 nucleotides PS417_15740 and PS417_15745 are separated by 73 nucleotides PS417_15745 and PS417_15750 overlap by 7 nucleotides PS417_15750 and PS417_15755 are separated by 10 nucleotides
PS417_15735: PS417_15735 - histidine kinase, at 3,450,875 to 3,452,677
_15735
PS417_15740: PS417_15740 - hypothetical protein, at 3,452,674 to 3,453,321
_15740
PS417_15745: PS417_15745 - lipid carrier protein, at 3,453,395 to 3,453,856
_15745
PS417_15750: PS417_15750 - protease, at 3,453,850 to 3,454,740
_15750
PS417_15755: PS417_15755 - protease, at 3,454,751 to 3,455,746
_15755
Position (kb)
3453
3454 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3452.658 kb on + strand at 3452.658 kb on + strand at 3452.658 kb on + strand at 3452.658 kb on + strand at 3452.659 kb on - strand at 3452.659 kb on - strand at 3452.686 kb on - strand at 3452.820 kb on + strand, within PS417_15740 at 3452.820 kb on + strand, within PS417_15740 at 3452.908 kb on + strand, within PS417_15740 at 3452.908 kb on + strand, within PS417_15740 at 3452.908 kb on + strand, within PS417_15740 at 3452.908 kb on + strand, within PS417_15740 at 3452.908 kb on + strand, within PS417_15740 at 3452.908 kb on + strand, within PS417_15740 at 3452.909 kb on - strand, within PS417_15740 at 3452.909 kb on - strand, within PS417_15740 at 3452.909 kb on - strand, within PS417_15740 at 3452.909 kb on - strand, within PS417_15740 at 3453.176 kb on - strand, within PS417_15740 at 3453.183 kb on + strand, within PS417_15740 at 3453.183 kb on + strand, within PS417_15740 at 3453.199 kb on - strand, within PS417_15740 at 3453.199 kb on - strand, within PS417_15740 at 3453.199 kb on - strand, within PS417_15740 at 3453.252 kb on + strand at 3453.253 kb on - strand, within PS417_15740 at 3453.463 kb on + strand, within PS417_15745 at 3453.539 kb on - strand, within PS417_15745 at 3453.539 kb on - strand at 3453.752 kb on - strand at 3454.142 kb on + strand at 3454.382 kb on + strand, within PS417_15750 at 3454.543 kb on + strand, within PS417_15750 at 3454.644 kb on - strand, within PS417_15750 at 3454.680 kb on - strand at 3454.710 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.01 mg/ml remove 3,452,658 + -1.3 3,452,658 + -0.1 3,452,658 + +0.1 3,452,658 + -0.4 3,452,659 - -1.7 3,452,659 - -0.8 3,452,686 - -0.4 3,452,820 + PS417_15740 0.23 -0.8 3,452,820 + PS417_15740 0.23 -0.2 3,452,908 + PS417_15740 0.36 +0.8 3,452,908 + PS417_15740 0.36 +0.9 3,452,908 + PS417_15740 0.36 -0.3 3,452,908 + PS417_15740 0.36 -0.1 3,452,908 + PS417_15740 0.36 +1.4 3,452,908 + PS417_15740 0.36 +0.5 3,452,909 - PS417_15740 0.36 +0.1 3,452,909 - PS417_15740 0.36 -0.3 3,452,909 - PS417_15740 0.36 +0.1 3,452,909 - PS417_15740 0.36 +0.2 3,453,176 - PS417_15740 0.77 -0.6 3,453,183 + PS417_15740 0.79 +0.5 3,453,183 + PS417_15740 0.79 -0.6 3,453,199 - PS417_15740 0.81 -0.1 3,453,199 - PS417_15740 0.81 -2.1 3,453,199 - PS417_15740 0.81 -1.2 3,453,252 + +1.8 3,453,253 - PS417_15740 0.89 -0.1 3,453,463 + PS417_15745 0.15 -0.5 3,453,539 - PS417_15745 0.31 -1.4 3,453,539 - -0.3 3,453,752 - +0.5 3,454,142 + -0.5 3,454,382 + PS417_15750 0.60 +0.2 3,454,543 + PS417_15750 0.78 -0.7 3,454,644 - PS417_15750 0.89 -0.4 3,454,680 - +0.7 3,454,710 - -1.1
Or see this region's nucleotide sequence