Experiment: Cisplatin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_15105 and PS417_15110 overlap by 4 nucleotides PS417_15110 and PS417_15115 are separated by 98 nucleotides
PS417_15105: PS417_15105 - membrane protein, at 3,302,757 to 3,304,496
_15105
PS417_15110: PS417_15110 - protein BatD, at 3,304,493 to 3,306,133
_15110
PS417_15115: PS417_15115 - exonuclease SbcD, at 3,306,232 to 3,307,473
_15115
Position (kb)
3304
3305
3306
3307 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 3303.712 kb on + strand, within PS417_15105 at 3303.790 kb on - strand, within PS417_15105 at 3303.841 kb on - strand, within PS417_15105 at 3303.930 kb on + strand, within PS417_15105 at 3303.931 kb on - strand, within PS417_15105 at 3303.931 kb on - strand, within PS417_15105 at 3303.972 kb on + strand, within PS417_15105 at 3303.982 kb on - strand, within PS417_15105 at 3304.815 kb on - strand, within PS417_15110 at 3304.922 kb on + strand, within PS417_15110 at 3304.922 kb on + strand, within PS417_15110 at 3304.923 kb on - strand, within PS417_15110 at 3305.105 kb on + strand, within PS417_15110 at 3305.578 kb on - strand, within PS417_15110 at 3305.578 kb on - strand, within PS417_15110 at 3305.860 kb on + strand, within PS417_15110 at 3306.005 kb on + strand at 3306.069 kb on + strand at 3306.070 kb on - strand at 3306.131 kb on + strand at 3306.131 kb on + strand at 3306.194 kb on - strand at 3306.212 kb on + strand at 3306.212 kb on + strand at 3306.422 kb on - strand, within PS417_15115 at 3306.704 kb on - strand, within PS417_15115 at 3306.704 kb on - strand, within PS417_15115
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.01 mg/ml remove 3,303,712 + PS417_15105 0.55 -1.0 3,303,790 - PS417_15105 0.59 -4.7 3,303,841 - PS417_15105 0.62 -1.3 3,303,930 + PS417_15105 0.67 -4.6 3,303,931 - PS417_15105 0.67 -1.3 3,303,931 - PS417_15105 0.67 +1.0 3,303,972 + PS417_15105 0.70 -6.1 3,303,982 - PS417_15105 0.70 -3.8 3,304,815 - PS417_15110 0.20 -1.0 3,304,922 + PS417_15110 0.26 -3.6 3,304,922 + PS417_15110 0.26 -4.2 3,304,923 - PS417_15110 0.26 -4.3 3,305,105 + PS417_15110 0.37 -4.1 3,305,578 - PS417_15110 0.66 -2.7 3,305,578 - PS417_15110 0.66 -1.3 3,305,860 + PS417_15110 0.83 -1.2 3,306,005 + -0.6 3,306,069 + -4.2 3,306,070 - -3.2 3,306,131 + -0.2 3,306,131 + +0.3 3,306,194 - +0.7 3,306,212 + -0.4 3,306,212 + -0.2 3,306,422 - PS417_15115 0.15 -3.5 3,306,704 - PS417_15115 0.38 -5.5 3,306,704 - PS417_15115 0.38 -1.0
Or see this region's nucleotide sequence