Strain Fitness in Pseudomonas simiae WCS417 around PS417_13880

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
3,048,418	-		PS417_13875	0.33	-0.4
3,048,418	-		PS417_13875	0.33	-0.1
3,048,526	-		PS417_13875	0.40	-0.0
3,048,561	+		PS417_13875	0.43	+0.1
3,048,837	-		PS417_13875	0.61	-2.5
3,048,859	+		PS417_13875	0.63	+1.7
3,048,860	-		PS417_13875	0.63	+0.3
3,048,917	+		PS417_13875	0.67	+0.2
3,049,079	+		PS417_13875	0.77	+0.0
3,049,098	+		PS417_13875	0.79	+1.4
3,049,098	+		PS417_13875	0.79	+0.3
3,049,099	-		PS417_13875	0.79	+1.5
3,049,182	-				+3.0
3,049,185	+		PS417_13875	0.84	-0.6
3,049,185	+		PS417_13875	0.84	+0.3
3,049,185	+		PS417_13875	0.84	+2.3
3,049,186	-		PS417_13875	0.84	-1.4
3,049,215	+		PS417_13875	0.86	-0.0
3,049,377	+				+0.6
3,049,377	+				-0.9
3,049,377	+				-1.4
3,049,377	+				+0.7
3,049,377	+				-0.1
3,049,377	+				-0.1
3,049,378	-				-0.9
3,049,416	+				+0.4
3,049,635	-				+3.2
3,049,731	+		PS417_13880	0.19	+0.1
3,049,824	-		PS417_13880	0.24	-0.2
3,049,879	+		PS417_13880	0.28	-1.9
3,049,880	-		PS417_13880	0.28	-0.6
3,049,906	-		PS417_13880	0.29	+0.1
3,049,916	-		PS417_13880	0.30	-0.4
3,050,412	+		PS417_13880	0.59	+0.1
3,050,412	+		PS417_13880	0.59	-0.9
3,050,412	+				+0.4
3,050,412	+		PS417_13880	0.59	-0.2
3,050,413	-		PS417_13880	0.60	-0.4
3,050,413	-		PS417_13880	0.60	-1.3
3,050,450	+				-1.0
3,050,451	-		PS417_13880	0.62	-2.0
3,050,530	+		PS417_13880	0.67	-2.4
3,050,531	-		PS417_13880	0.67	+0.1
3,050,577	-		PS417_13880	0.69	+1.0
3,050,958	+				+1.0
3,050,972	+				-0.5
3,051,040	+				+0.2
3,051,091	-				+1.0
3,051,154	+				-0.4
3,051,154	+				-0.1
3,051,165	-				+0.2
3,051,241	-				-0.6
3,051,241	-				+2.6
3,051,313	+				-0.0
3,051,313	+				-0.8
3,051,313	+				-0.8
3,051,314	+				+1.0
3,051,330	+				+1.0
3,051,599	+		PS417_13885	0.80	+1.0
3,051,599	+		PS417_13885	0.80	+1.5
3,051,619	-		PS417_13885	0.86	-0.7
3,051,619	-		PS417_13885	0.86	+0.2
3,051,619	-		PS417_13885	0.86	-0.9
3,051,683	-				-1.3
3,051,779	-				+0.6