Experiment: Cisplatin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_12670 and PS417_12675 are separated by 107 nucleotides PS417_12675 and PS417_12680 are separated by 46 nucleotides PS417_12680 and PS417_12685 are separated by 143 nucleotides PS417_12685 and PS417_12690 are separated by 12 nucleotides
PS417_12670: PS417_12670 - hypothetical protein, at 2,758,327 to 2,758,596
_12670
PS417_12675: PS417_12675 - hypothetical protein, at 2,758,704 to 2,758,973
_12675
PS417_12680: PS417_12680 - hypothetical protein, at 2,759,020 to 2,759,379
_12680
PS417_12685: PS417_12685 - fructokinase, at 2,759,523 to 2,760,461
_12685
PS417_12690: PS417_12690 - xylulose kinase, at 2,760,474 to 2,761,955
_12690
Position (kb)
2759
2760
2761 Strain fitness (log2 ratio)
-1
0
1 at 2758.591 kb on + strand at 2758.648 kb on + strand at 2759.032 kb on + strand at 2759.134 kb on + strand at 2759.134 kb on + strand, within PS417_12680 at 2759.135 kb on - strand, within PS417_12680 at 2759.135 kb on - strand, within PS417_12680 at 2759.294 kb on + strand, within PS417_12680 at 2759.315 kb on + strand, within PS417_12680 at 2759.315 kb on + strand, within PS417_12680 at 2759.316 kb on - strand, within PS417_12680 at 2759.316 kb on - strand, within PS417_12680 at 2759.341 kb on + strand, within PS417_12680 at 2759.342 kb on - strand, within PS417_12680 at 2759.342 kb on - strand, within PS417_12680 at 2759.402 kb on - strand at 2759.405 kb on + strand at 2759.458 kb on - strand at 2760.164 kb on - strand, within PS417_12685 at 2760.382 kb on + strand at 2760.382 kb on + strand at 2760.383 kb on - strand at 2760.383 kb on - strand at 2760.457 kb on + strand at 2760.457 kb on + strand at 2760.458 kb on - strand at 2760.458 kb on - strand at 2760.458 kb on - strand at 2760.458 kb on - strand at 2760.461 kb on + strand at 2760.461 kb on + strand at 2760.461 kb on + strand at 2760.462 kb on - strand at 2761.132 kb on + strand, within PS417_12690 at 2761.133 kb on - strand, within PS417_12690 at 2761.451 kb on - strand, within PS417_12690 at 2761.460 kb on - strand, within PS417_12690
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.01 mg/ml remove 2,758,591 + +0.1 2,758,648 + -0.4 2,759,032 + +0.1 2,759,134 + +1.6 2,759,134 + PS417_12680 0.32 -0.1 2,759,135 - PS417_12680 0.32 +0.3 2,759,135 - PS417_12680 0.32 -0.1 2,759,294 + PS417_12680 0.76 -0.0 2,759,315 + PS417_12680 0.82 -0.1 2,759,315 + PS417_12680 0.82 +0.2 2,759,316 - PS417_12680 0.82 +0.1 2,759,316 - PS417_12680 0.82 -0.8 2,759,341 + PS417_12680 0.89 +1.6 2,759,342 - PS417_12680 0.89 +1.0 2,759,342 - PS417_12680 0.89 -1.5 2,759,402 - -0.1 2,759,405 + -0.4 2,759,458 - -0.0 2,760,164 - PS417_12685 0.68 +0.4 2,760,382 + +0.5 2,760,382 + -0.5 2,760,383 - -0.6 2,760,383 - -0.4 2,760,457 + -0.2 2,760,457 + -1.7 2,760,458 - -0.2 2,760,458 - +1.1 2,760,458 - -0.5 2,760,458 - -0.7 2,760,461 + +0.3 2,760,461 + +0.3 2,760,461 + +0.1 2,760,462 - -0.9 2,761,132 + PS417_12690 0.44 +0.8 2,761,133 - PS417_12690 0.44 -0.2 2,761,451 - PS417_12690 0.66 -0.0 2,761,460 - PS417_12690 0.67 +0.2
Or see this region's nucleotide sequence