Strain Fitness in Pseudomonas simiae WCS417 around PS417_12235
Experiment: Cisplatin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.01 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,659,004 | + | +0.3 | |||
2,659,007 | + | +1.2 | |||
2,659,833 | + | -0.5 | |||
2,659,834 | - | +0.4 | |||
2,659,889 | + | -1.4 | |||
2,659,916 | + | -1.3 | |||
2,660,142 | + | +0.4 | |||
2,660,143 | - | +0.0 | |||
2,660,233 | - | PS417_12240 | 0.14 | -0.3 | |
2,660,354 | - | PS417_12240 | 0.19 | +0.4 | |
2,660,354 | - | PS417_12240 | 0.19 | -0.8 | |
2,660,416 | + | PS417_12240 | 0.22 | -0.7 | |
2,660,416 | + | PS417_12240 | 0.22 | -1.0 | |
2,660,764 | + | PS417_12240 | 0.37 | +0.0 | |
2,660,764 | + | PS417_12240 | 0.37 | -0.0 | |
2,660,765 | - | PS417_12240 | 0.37 | -0.4 | |
2,660,765 | - | PS417_12240 | 0.37 | -0.5 | |
2,660,765 | - | PS417_12240 | 0.37 | -0.3 |
Or see this region's nucleotide sequence