Experiment: Cisplatin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_11795 and PS417_11800 are separated by 27 nucleotides PS417_11800 and PS417_11805 are separated by 113 nucleotides
PS417_11795: PS417_11795 - FAD-dependent oxidoreductase, at 2,566,989 to 2,568,281
_11795
PS417_11800: PS417_11800 - LysR family transcriptional regulator, at 2,568,309 to 2,569,202
_11800
PS417_11805: PS417_11805 - D-threo-aldose 1-dehydrogenase, at 2,569,316 to 2,570,320
_11805
Position (kb)
2568
2569
2570 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2567.479 kb on + strand, within PS417_11795 at 2567.479 kb on + strand, within PS417_11795 at 2567.479 kb on + strand, within PS417_11795 at 2567.505 kb on + strand, within PS417_11795 at 2567.763 kb on + strand, within PS417_11795 at 2567.764 kb on - strand, within PS417_11795 at 2567.857 kb on - strand, within PS417_11795 at 2567.940 kb on + strand, within PS417_11795 at 2567.941 kb on - strand, within PS417_11795 at 2567.941 kb on - strand, within PS417_11795 at 2568.063 kb on + strand, within PS417_11795 at 2568.147 kb on - strand, within PS417_11795 at 2568.280 kb on - strand at 2568.349 kb on - strand at 2568.823 kb on + strand at 2568.823 kb on + strand, within PS417_11800 at 2568.823 kb on + strand, within PS417_11800 at 2568.824 kb on - strand, within PS417_11800 at 2568.824 kb on - strand, within PS417_11800 at 2568.824 kb on - strand, within PS417_11800 at 2568.833 kb on + strand, within PS417_11800 at 2568.910 kb on + strand, within PS417_11800 at 2568.910 kb on + strand, within PS417_11800 at 2568.911 kb on - strand at 2569.265 kb on + strand at 2569.266 kb on - strand at 2569.312 kb on + strand at 2569.313 kb on - strand at 2569.572 kb on + strand, within PS417_11805 at 2569.572 kb on + strand, within PS417_11805 at 2569.573 kb on - strand, within PS417_11805 at 2569.772 kb on + strand, within PS417_11805 at 2569.772 kb on + strand, within PS417_11805 at 2569.857 kb on + strand, within PS417_11805 at 2569.857 kb on + strand, within PS417_11805 at 2569.935 kb on - strand, within PS417_11805
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.01 mg/ml remove 2,567,479 + PS417_11795 0.38 +0.8 2,567,479 + PS417_11795 0.38 +0.0 2,567,479 + PS417_11795 0.38 +1.5 2,567,505 + PS417_11795 0.40 -0.9 2,567,763 + PS417_11795 0.60 +1.0 2,567,764 - PS417_11795 0.60 +0.1 2,567,857 - PS417_11795 0.67 -0.6 2,567,940 + PS417_11795 0.74 +1.4 2,567,941 - PS417_11795 0.74 +0.0 2,567,941 - PS417_11795 0.74 +0.2 2,568,063 + PS417_11795 0.83 +1.6 2,568,147 - PS417_11795 0.90 +2.6 2,568,280 - -0.9 2,568,349 - +0.0 2,568,823 + +0.1 2,568,823 + PS417_11800 0.57 -0.2 2,568,823 + PS417_11800 0.57 -0.4 2,568,824 - PS417_11800 0.58 -0.5 2,568,824 - PS417_11800 0.58 -0.4 2,568,824 - PS417_11800 0.58 -1.0 2,568,833 + PS417_11800 0.59 -0.5 2,568,910 + PS417_11800 0.67 -2.1 2,568,910 + PS417_11800 0.67 -0.7 2,568,911 - +0.1 2,569,265 + -0.7 2,569,266 - +0.5 2,569,312 + -0.3 2,569,313 - +0.4 2,569,572 + PS417_11805 0.25 +2.6 2,569,572 + PS417_11805 0.25 -0.2 2,569,573 - PS417_11805 0.26 -1.4 2,569,772 + PS417_11805 0.45 -0.8 2,569,772 + PS417_11805 0.45 -0.1 2,569,857 + PS417_11805 0.54 +0.1 2,569,857 + PS417_11805 0.54 -0.4 2,569,935 - PS417_11805 0.62 +0.0
Or see this region's nucleotide sequence