Experiment: Cisplatin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_10715 and PS417_10720 are separated by 151 nucleotides PS417_10720 and PS417_10725 are separated by 1 nucleotides PS417_10725 and PS417_10730 are separated by 56 nucleotides
PS417_10715: PS417_10715 - Cro/Cl family transcriptional regulator, at 2,290,159 to 2,290,524
_10715
PS417_10720: PS417_10720 - chemotaxis protein CheY, at 2,290,676 to 2,291,317
_10720
PS417_10725: PS417_10725 - excinuclease ABC subunit C, at 2,291,319 to 2,293,142
_10725
PS417_10730: PS417_10730 - hypothetical protein, at 2,293,199 to 2,294,659
_10730
Position (kb)
2291
2292
2293
2294 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 2290.443 kb on + strand, within PS417_10715 at 2290.443 kb on + strand, within PS417_10715 at 2290.443 kb on + strand, within PS417_10715 at 2290.445 kb on + strand, within PS417_10715 at 2290.528 kb on - strand at 2290.541 kb on + strand at 2290.570 kb on - strand at 2290.587 kb on + strand at 2290.587 kb on + strand at 2290.587 kb on + strand at 2290.588 kb on - strand at 2290.588 kb on - strand at 2290.589 kb on + strand at 2290.589 kb on + strand at 2290.589 kb on + strand at 2290.590 kb on - strand at 2290.591 kb on + strand at 2290.591 kb on + strand at 2290.591 kb on + strand at 2290.591 kb on + strand at 2290.591 kb on + strand at 2290.591 kb on + strand at 2290.591 kb on + strand at 2290.591 kb on + strand at 2290.591 kb on + strand at 2290.592 kb on - strand at 2290.592 kb on - strand at 2290.592 kb on - strand at 2290.592 kb on - strand at 2290.592 kb on - strand at 2290.592 kb on - strand at 2290.592 kb on - strand at 2290.592 kb on - strand at 2290.592 kb on - strand at 2290.593 kb on + strand at 2290.593 kb on + strand at 2290.593 kb on + strand at 2290.593 kb on + strand at 2290.593 kb on + strand at 2290.594 kb on - strand at 2290.594 kb on - strand at 2290.594 kb on - strand at 2290.609 kb on - strand at 2290.609 kb on - strand at 2290.649 kb on + strand at 2290.650 kb on - strand at 2290.650 kb on - strand at 2290.650 kb on - strand at 2290.650 kb on - strand at 2290.651 kb on + strand at 2290.652 kb on - strand at 2290.652 kb on - strand at 2290.682 kb on - strand at 2290.692 kb on + strand at 2290.717 kb on + strand at 2290.717 kb on + strand at 2290.726 kb on + strand at 2290.761 kb on + strand at 2290.761 kb on + strand, within PS417_10720 at 2290.762 kb on - strand, within PS417_10720 at 2291.045 kb on + strand, within PS417_10720 at 2291.045 kb on + strand, within PS417_10720 at 2291.045 kb on + strand, within PS417_10720 at 2291.050 kb on - strand, within PS417_10720 at 2291.412 kb on + strand at 2291.413 kb on - strand at 2291.413 kb on - strand at 2291.454 kb on + strand at 2291.454 kb on + strand at 2291.615 kb on + strand, within PS417_10725 at 2291.629 kb on - strand, within PS417_10725 at 2291.700 kb on + strand, within PS417_10725 at 2291.701 kb on - strand, within PS417_10725 at 2291.701 kb on - strand, within PS417_10725 at 2292.023 kb on - strand, within PS417_10725 at 2292.223 kb on - strand, within PS417_10725 at 2292.226 kb on - strand, within PS417_10725 at 2292.226 kb on - strand, within PS417_10725 at 2292.835 kb on - strand, within PS417_10725 at 2292.835 kb on - strand, within PS417_10725 at 2293.119 kb on + strand at 2293.140 kb on + strand at 2293.141 kb on - strand at 2293.141 kb on - strand at 2293.153 kb on + strand at 2293.256 kb on + strand at 2293.262 kb on + strand at 2293.262 kb on + strand at 2293.264 kb on + strand at 2293.265 kb on - strand at 2293.450 kb on - strand, within PS417_10730 at 2293.450 kb on - strand, within PS417_10730 at 2293.450 kb on - strand, within PS417_10730 at 2293.517 kb on + strand, within PS417_10730 at 2293.517 kb on + strand, within PS417_10730 at 2293.518 kb on - strand, within PS417_10730 at 2293.518 kb on - strand at 2293.520 kb on - strand, within PS417_10730 at 2293.549 kb on - strand, within PS417_10730 at 2293.549 kb on - strand at 2293.555 kb on + strand at 2293.556 kb on - strand, within PS417_10730 at 2293.675 kb on - strand, within PS417_10730 at 2293.714 kb on - strand, within PS417_10730 at 2293.780 kb on + strand, within PS417_10730 at 2293.784 kb on + strand, within PS417_10730 at 2293.784 kb on + strand, within PS417_10730 at 2293.785 kb on - strand, within PS417_10730 at 2293.939 kb on + strand, within PS417_10730 at 2293.987 kb on - strand, within PS417_10730 at 2294.011 kb on + strand, within PS417_10730 at 2294.068 kb on + strand, within PS417_10730 at 2294.068 kb on + strand, within PS417_10730 at 2294.068 kb on + strand, within PS417_10730 at 2294.068 kb on + strand, within PS417_10730 at 2294.069 kb on - strand, within PS417_10730 at 2294.069 kb on - strand, within PS417_10730 at 2294.069 kb on - strand, within PS417_10730 at 2294.069 kb on - strand, within PS417_10730 at 2294.071 kb on - strand, within PS417_10730 at 2294.092 kb on - strand, within PS417_10730 at 2294.117 kb on - strand, within PS417_10730 at 2294.117 kb on - strand, within PS417_10730
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.01 mg/ml remove 2,290,443 + PS417_10715 0.78 -0.3 2,290,443 + PS417_10715 0.78 -0.6 2,290,443 + PS417_10715 0.78 -2.4 2,290,445 + PS417_10715 0.78 -1.2 2,290,528 - +0.5 2,290,541 + -0.1 2,290,570 - -1.0 2,290,587 + +2.5 2,290,587 + -0.1 2,290,587 + -0.2 2,290,588 - -0.6 2,290,588 - -0.7 2,290,589 + +1.5 2,290,589 + -0.4 2,290,589 + +0.5 2,290,590 - +1.2 2,290,591 + +0.3 2,290,591 + +1.0 2,290,591 + -0.2 2,290,591 + +0.4 2,290,591 + +1.2 2,290,591 + +1.3 2,290,591 + +1.6 2,290,591 + +0.3 2,290,591 + +0.2 2,290,592 - -1.9 2,290,592 - +0.5 2,290,592 - +1.3 2,290,592 - -0.3 2,290,592 - -0.3 2,290,592 - -0.7 2,290,592 - -0.4 2,290,592 - -0.4 2,290,592 - -0.3 2,290,593 + -0.5 2,290,593 + +0.3 2,290,593 + -1.2 2,290,593 + -0.2 2,290,593 + -0.4 2,290,594 - +0.2 2,290,594 - +0.7 2,290,594 - +0.6 2,290,609 - -0.6 2,290,609 - -2.7 2,290,649 + -0.0 2,290,650 - -0.4 2,290,650 - -2.9 2,290,650 - +1.2 2,290,650 - -4.5 2,290,651 + -0.5 2,290,652 - -2.4 2,290,652 - -3.9 2,290,682 - -5.2 2,290,692 + -0.5 2,290,717 + +0.2 2,290,717 + +0.3 2,290,726 + -1.4 2,290,761 + +0.2 2,290,761 + PS417_10720 0.13 +0.2 2,290,762 - PS417_10720 0.13 +1.2 2,291,045 + PS417_10720 0.57 -0.3 2,291,045 + PS417_10720 0.57 -0.6 2,291,045 + PS417_10720 0.57 -0.8 2,291,050 - PS417_10720 0.58 -1.8 2,291,412 + -0.4 2,291,413 - -3.1 2,291,413 - -1.8 2,291,454 + -4.9 2,291,454 + -4.5 2,291,615 + PS417_10725 0.16 -1.5 2,291,629 - PS417_10725 0.17 -2.3 2,291,700 + PS417_10725 0.21 -4.8 2,291,701 - PS417_10725 0.21 -1.4 2,291,701 - PS417_10725 0.21 -3.1 2,292,023 - PS417_10725 0.39 -4.3 2,292,223 - PS417_10725 0.50 -3.5 2,292,226 - PS417_10725 0.50 -3.5 2,292,226 - PS417_10725 0.50 -3.8 2,292,835 - PS417_10725 0.83 -0.4 2,292,835 - PS417_10725 0.83 -3.8 2,293,119 + -3.1 2,293,140 + -1.0 2,293,141 - +0.1 2,293,141 - +0.2 2,293,153 + +0.0 2,293,256 + +0.5 2,293,262 + -0.2 2,293,262 + -1.4 2,293,264 + -0.3 2,293,265 - -1.8 2,293,450 - PS417_10730 0.17 -0.3 2,293,450 - PS417_10730 0.17 -0.1 2,293,450 - PS417_10730 0.17 +0.3 2,293,517 + PS417_10730 0.22 +1.2 2,293,517 + PS417_10730 0.22 +0.3 2,293,518 - PS417_10730 0.22 -1.0 2,293,518 - +1.2 2,293,520 - PS417_10730 0.22 -1.3 2,293,549 - PS417_10730 0.24 +0.3 2,293,549 - -0.4 2,293,555 + +1.2 2,293,556 - PS417_10730 0.24 -0.6 2,293,675 - PS417_10730 0.33 -0.3 2,293,714 - PS417_10730 0.35 -0.7 2,293,780 + PS417_10730 0.40 +1.2 2,293,784 + PS417_10730 0.40 +0.1 2,293,784 + PS417_10730 0.40 +0.6 2,293,785 - PS417_10730 0.40 -0.3 2,293,939 + PS417_10730 0.51 +1.0 2,293,987 - PS417_10730 0.54 -0.8 2,294,011 + PS417_10730 0.56 -1.5 2,294,068 + PS417_10730 0.59 +1.6 2,294,068 + PS417_10730 0.59 +0.5 2,294,068 + PS417_10730 0.59 -0.1 2,294,068 + PS417_10730 0.59 -0.4 2,294,069 - PS417_10730 0.60 -0.2 2,294,069 - PS417_10730 0.60 -0.8 2,294,069 - PS417_10730 0.60 +1.0 2,294,069 - PS417_10730 0.60 -0.4 2,294,071 - PS417_10730 0.60 +1.2 2,294,092 - PS417_10730 0.61 +0.3 2,294,117 - PS417_10730 0.63 -0.8 2,294,117 - PS417_10730 0.63 -0.6
Or see this region's nucleotide sequence