Strain Fitness in Pseudomonas simiae WCS417 around PS417_08240
Experiment: Cisplatin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.01 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,804,772 | - | PS417_08235 | 0.17 | +1.3 | |
| 1,805,053 | - | PS417_08235 | 0.43 | -0.3 | |
| 1,805,195 | - | PS417_08235 | 0.56 | +1.3 | |
| 1,805,354 | - | PS417_08235 | 0.71 | +0.3 | |
| 1,805,673 | - | -0.7 | |||
| 1,805,753 | - | PS417_08240 | 0.10 | +0.6 | |
| 1,806,069 | + | PS417_08240 | 0.51 | -1.5 | |
| 1,806,567 | + | +1.3 | |||
| 1,806,954 | - | PS417_08245 | 0.50 | +0.8 | |
| 1,807,354 | - | +0.1 | |||
| 1,807,367 | - | +0.7 | |||
| 1,807,444 | + | -0.7 | |||
| 1,807,445 | - | +0.4 |
Or see this region's nucleotide sequence