Experiment: Cisplatin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_07520 and PS417_07525 are separated by 134 nucleotides PS417_07525 and PS417_07530 are separated by 13 nucleotides PS417_07530 and PS417_07535 are separated by 140 nucleotides
PS417_07520: PS417_07520 - 23S rRNA methyltransferase, at 1,654,257 to 1,655,333
_07520
PS417_07525: PS417_07525 - sulfurtransferase, at 1,655,468 to 1,655,719
_07525
PS417_07530: PS417_07530 - multidrug transporter, at 1,655,733 to 1,657,127
_07530
PS417_07535: PS417_07535 - erythronate-4-phosphate dehydrogenase, at 1,657,268 to 1,658,410
_07535
Position (kb)
1655
1656
1657
1658 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1655.028 kb on - strand, within PS417_07520 at 1655.262 kb on + strand at 1655.390 kb on + strand at 1655.390 kb on + strand at 1655.390 kb on + strand at 1655.390 kb on + strand at 1655.391 kb on - strand at 1655.404 kb on + strand at 1655.467 kb on + strand at 1655.467 kb on + strand at 1656.070 kb on + strand, within PS417_07530 at 1656.071 kb on - strand, within PS417_07530 at 1656.127 kb on + strand, within PS417_07530 at 1656.127 kb on + strand, within PS417_07530 at 1656.128 kb on - strand, within PS417_07530 at 1656.235 kb on + strand, within PS417_07530 at 1656.387 kb on + strand, within PS417_07530 at 1656.387 kb on + strand, within PS417_07530 at 1656.387 kb on + strand, within PS417_07530 at 1656.430 kb on + strand, within PS417_07530 at 1656.430 kb on + strand, within PS417_07530 at 1656.430 kb on + strand at 1656.430 kb on + strand, within PS417_07530 at 1656.448 kb on + strand, within PS417_07530 at 1656.562 kb on + strand, within PS417_07530 at 1656.574 kb on + strand at 1656.667 kb on + strand, within PS417_07530 at 1656.667 kb on + strand, within PS417_07530 at 1656.668 kb on - strand, within PS417_07530 at 1656.670 kb on + strand, within PS417_07530 at 1656.671 kb on - strand, within PS417_07530 at 1656.713 kb on - strand at 1656.926 kb on - strand, within PS417_07530 at 1657.129 kb on + strand at 1657.130 kb on - strand at 1657.130 kb on - strand at 1657.130 kb on - strand at 1657.142 kb on + strand at 1657.143 kb on - strand at 1657.170 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.01 mg/ml remove 1,655,028 - PS417_07520 0.72 -0.5 1,655,262 + +1.3 1,655,390 + -0.1 1,655,390 + -0.9 1,655,390 + -2.4 1,655,390 + -1.9 1,655,391 - +1.3 1,655,404 + +0.5 1,655,467 + +0.2 1,655,467 + -1.7 1,656,070 + PS417_07530 0.24 -2.5 1,656,071 - PS417_07530 0.24 -1.5 1,656,127 + PS417_07530 0.28 -2.1 1,656,127 + PS417_07530 0.28 -0.3 1,656,128 - PS417_07530 0.28 -0.8 1,656,235 + PS417_07530 0.36 -2.0 1,656,387 + PS417_07530 0.47 -1.8 1,656,387 + PS417_07530 0.47 -2.0 1,656,387 + PS417_07530 0.47 -1.5 1,656,430 + PS417_07530 0.50 +0.3 1,656,430 + PS417_07530 0.50 -2.4 1,656,430 + -1.5 1,656,430 + PS417_07530 0.50 -2.4 1,656,448 + PS417_07530 0.51 -0.9 1,656,562 + PS417_07530 0.59 -0.1 1,656,574 + -0.7 1,656,667 + PS417_07530 0.67 -1.9 1,656,667 + PS417_07530 0.67 -0.6 1,656,668 - PS417_07530 0.67 -2.3 1,656,670 + PS417_07530 0.67 -1.8 1,656,671 - PS417_07530 0.67 -3.6 1,656,713 - +0.3 1,656,926 - PS417_07530 0.86 -1.7 1,657,129 + -2.4 1,657,130 - -2.7 1,657,130 - +0.7 1,657,130 - -3.5 1,657,142 + -2.4 1,657,143 - +0.1 1,657,170 + +0.2
Or see this region's nucleotide sequence