Experiment: Cisplatin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00710 and PS417_00715 overlap by 4 nucleotides PS417_00715 and PS417_00720 overlap by 4 nucleotides PS417_00720 and PS417_00725 overlap by 4 nucleotides
PS417_00710: PS417_00710 - fusaric acid resistance protein, at 147,520 to 149,598
_00710
PS417_00715: PS417_00715 - required for octanoate transport, together with NodT, MFP, and FUSC proteins (PS417_00725, PS417_00720, PS417_00710) (from data) , at 149,595 to 149,804
_00715
PS417_00720: PS417_00720 - membrane protein, at 149,801 to 150,691
_00720
PS417_00725: PS417_00725 - RND transporter, at 150,688 to 152,130
_00725
Position (kb)
149
150 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 148.627 kb on + strand, within PS417_00710 at 148.823 kb on - strand, within PS417_00710 at 149.300 kb on - strand, within PS417_00710 at 149.595 kb on - strand at 149.657 kb on + strand, within PS417_00715 at 149.657 kb on + strand, within PS417_00715 at 149.657 kb on + strand, within PS417_00715 at 149.658 kb on - strand, within PS417_00715 at 149.658 kb on - strand at 149.658 kb on - strand, within PS417_00715 at 149.661 kb on + strand, within PS417_00715 at 149.661 kb on + strand, within PS417_00715 at 149.661 kb on + strand, within PS417_00715 at 149.661 kb on + strand, within PS417_00715 at 149.662 kb on - strand, within PS417_00715 at 149.662 kb on - strand, within PS417_00715 at 149.662 kb on - strand, within PS417_00715 at 149.662 kb on - strand, within PS417_00715 at 149.662 kb on - strand, within PS417_00715 at 149.662 kb on - strand, within PS417_00715 at 149.662 kb on - strand, within PS417_00715 at 149.662 kb on - strand, within PS417_00715 at 149.709 kb on + strand, within PS417_00715 at 149.891 kb on + strand, within PS417_00720 at 149.891 kb on + strand, within PS417_00720 at 149.891 kb on + strand at 149.891 kb on + strand, within PS417_00720 at 149.891 kb on + strand, within PS417_00720 at 149.892 kb on - strand, within PS417_00720 at 149.892 kb on - strand, within PS417_00720 at 149.892 kb on - strand, within PS417_00720 at 149.892 kb on - strand, within PS417_00720 at 149.894 kb on + strand, within PS417_00720 at 149.894 kb on + strand, within PS417_00720 at 149.894 kb on + strand, within PS417_00720 at 149.894 kb on + strand, within PS417_00720 at 149.894 kb on + strand, within PS417_00720 at 150.670 kb on + strand at 150.757 kb on + strand at 150.772 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.01 mg/ml remove 148,627 + PS417_00710 0.53 -0.2 148,823 - PS417_00710 0.63 +0.4 149,300 - PS417_00710 0.86 +0.1 149,595 - -0.6 149,657 + PS417_00715 0.30 -0.7 149,657 + PS417_00715 0.30 +1.0 149,657 + PS417_00715 0.30 +1.6 149,658 - PS417_00715 0.30 +0.5 149,658 - -1.0 149,658 - PS417_00715 0.30 -0.5 149,661 + PS417_00715 0.31 +0.4 149,661 + PS417_00715 0.31 -1.4 149,661 + PS417_00715 0.31 +0.3 149,661 + PS417_00715 0.31 +3.6 149,662 - PS417_00715 0.32 +1.1 149,662 - PS417_00715 0.32 -1.4 149,662 - PS417_00715 0.32 -0.1 149,662 - PS417_00715 0.32 +0.2 149,662 - PS417_00715 0.32 +0.2 149,662 - PS417_00715 0.32 -1.6 149,662 - PS417_00715 0.32 -0.3 149,662 - PS417_00715 0.32 +0.0 149,709 + PS417_00715 0.54 -0.4 149,891 + PS417_00720 0.10 -0.2 149,891 + PS417_00720 0.10 -0.4 149,891 + -0.4 149,891 + PS417_00720 0.10 +0.4 149,891 + PS417_00720 0.10 +0.3 149,892 - PS417_00720 0.10 +2.2 149,892 - PS417_00720 0.10 -1.0 149,892 - PS417_00720 0.10 +0.4 149,892 - PS417_00720 0.10 +0.1 149,894 + PS417_00720 0.10 -0.3 149,894 + PS417_00720 0.10 +0.8 149,894 + PS417_00720 0.10 -0.2 149,894 + PS417_00720 0.10 -1.9 149,894 + PS417_00720 0.10 +0.3 150,670 + -0.6 150,757 + +1.1 150,772 - +2.1
Or see this region's nucleotide sequence