Strain Fitness in Pseudomonas simiae WCS417 around PS417_06765
Experiment: Cisplatin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.01 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,495,992 | + | PS417_06755 | 0.45 | +0.5 | |
1,495,992 | + | PS417_06755 | 0.45 | -0.5 | |
1,495,992 | + | PS417_06755 | 0.45 | +2.7 | |
1,495,993 | - | PS417_06755 | 0.45 | -0.3 | |
1,496,418 | + | PS417_06755 | 0.79 | -1.2 | |
1,496,447 | + | PS417_06755 | 0.81 | -0.2 | |
1,496,447 | + | PS417_06755 | 0.81 | -0.2 | |
1,496,538 | + | PS417_06755 | 0.89 | +0.9 | |
1,496,539 | - | PS417_06755 | 0.89 | +0.3 | |
1,496,708 | + | -0.4 | |||
1,496,794 | + | -2.0 | |||
1,496,795 | - | -0.3 | |||
1,497,107 | - | PS417_06765 | 0.16 | +3.4 | |
1,497,158 | - | PS417_06765 | 0.19 | +2.6 | |
1,498,769 | + | PS417_06770 | 0.14 | +1.6 | |
1,498,770 | - | PS417_06770 | 0.14 | +1.6 | |
1,498,832 | + | PS417_06770 | 0.16 | +0.8 | |
1,498,919 | - | PS417_06770 | 0.19 | +0.8 | |
1,499,167 | - | PS417_06770 | 0.26 | -0.2 | |
1,499,167 | - | PS417_06770 | 0.26 | +0.4 | |
1,499,208 | + | PS417_06770 | 0.28 | +2.3 | |
1,499,209 | - | PS417_06770 | 0.28 | +0.2 |
Or see this region's nucleotide sequence