Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00395 and PS417_00400 are separated by 56 nucleotides PS417_00400 and PS417_00405 are separated by 74 nucleotides PS417_00405 and PS417_00410 are separated by 269 nucleotides
PS417_00395: PS417_00395 - serine kinase, at 76,603 to 77,556
_00395
PS417_00400: PS417_00400 - hypothetical protein, at 77,613 to 77,903
_00400
PS417_00405: PS417_00405 - DNA polymerase I, at 77,978 to 80,755
_00405
PS417_00410: PS417_00410 - GTP-binding protein, at 81,025 to 81,666
_00410
Position (kb) 77
78
79
80
81 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 77.186 kb on - strand, within PS417_00395 at 77.607 kb on - strand at 77.652 kb on - strand, within PS417_00400 at 77.897 kb on + strand at 77.897 kb on + strand at 77.897 kb on + strand at 77.898 kb on - strand at 77.898 kb on - strand at 77.898 kb on - strand at 77.906 kb on + strand at 78.806 kb on + strand, within PS417_00405 at 78.865 kb on - strand, within PS417_00405 at 78.929 kb on + strand, within PS417_00405 at 78.929 kb on + strand, within PS417_00405 at 78.930 kb on - strand, within PS417_00405 at 78.930 kb on - strand at 79.106 kb on + strand, within PS417_00405 at 79.106 kb on + strand, within PS417_00405 at 79.106 kb on + strand, within PS417_00405 at 79.110 kb on + strand, within PS417_00405 at 79.304 kb on + strand, within PS417_00405 at 79.305 kb on - strand, within PS417_00405 at 79.305 kb on - strand, within PS417_00405 at 79.305 kb on - strand, within PS417_00405 at 79.308 kb on + strand, within PS417_00405 at 79.308 kb on + strand, within PS417_00405 at 79.309 kb on - strand, within PS417_00405 at 79.309 kb on - strand, within PS417_00405 at 79.358 kb on + strand, within PS417_00405 at 79.368 kb on - strand, within PS417_00405 at 79.514 kb on - strand, within PS417_00405 at 79.886 kb on + strand, within PS417_00405 at 80.070 kb on + strand, within PS417_00405 at 80.330 kb on - strand, within PS417_00405 at 80.339 kb on + strand, within PS417_00405 at 80.339 kb on + strand, within PS417_00405 at 80.369 kb on + strand, within PS417_00405 at 80.370 kb on - strand, within PS417_00405 at 80.370 kb on - strand, within PS417_00405 at 80.408 kb on + strand, within PS417_00405 at 80.799 kb on - strand at 80.829 kb on + strand at 80.853 kb on + strand at 80.854 kb on - strand at 80.911 kb on + strand at 80.911 kb on + strand at 80.911 kb on + strand at 80.911 kb on + strand at 80.912 kb on - strand at 80.912 kb on - strand at 80.912 kb on - strand at 80.921 kb on + strand at 80.921 kb on + strand at 80.921 kb on + strand at 80.936 kb on - strand at 81.740 kb on + strand at 81.740 kb on + strand at 81.740 kb on + strand at 81.740 kb on + strand at 81.742 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.008 mg/ml remove 77,186 - PS417_00395 0.61 -0.5 77,607 - -0.3 77,652 - PS417_00400 0.13 +0.9 77,897 + +0.3 77,897 + +0.5 77,897 + -0.3 77,898 - +1.5 77,898 - -0.2 77,898 - -0.7 77,906 + +0.0 78,806 + PS417_00405 0.30 +0.5 78,865 - PS417_00405 0.32 -1.3 78,929 + PS417_00405 0.34 -0.9 78,929 + PS417_00405 0.34 -0.7 78,930 - PS417_00405 0.34 +3.5 78,930 - -0.5 79,106 + PS417_00405 0.41 -2.2 79,106 + PS417_00405 0.41 -2.0 79,106 + PS417_00405 0.41 -1.2 79,110 + PS417_00405 0.41 -2.1 79,304 + PS417_00405 0.48 -0.8 79,305 - PS417_00405 0.48 -0.9 79,305 - PS417_00405 0.48 -1.0 79,305 - PS417_00405 0.48 -0.9 79,308 + PS417_00405 0.48 -0.6 79,308 + PS417_00405 0.48 +0.4 79,309 - PS417_00405 0.48 -0.7 79,309 - PS417_00405 0.48 -3.7 79,358 + PS417_00405 0.50 -0.7 79,368 - PS417_00405 0.50 +0.5 79,514 - PS417_00405 0.55 -2.2 79,886 + PS417_00405 0.69 -0.1 80,070 + PS417_00405 0.75 -1.3 80,330 - PS417_00405 0.85 -0.7 80,339 + PS417_00405 0.85 -1.1 80,339 + PS417_00405 0.85 -0.7 80,369 + PS417_00405 0.86 -0.9 80,370 - PS417_00405 0.86 -0.8 80,370 - PS417_00405 0.86 -0.9 80,408 + PS417_00405 0.87 -0.7 80,799 - -0.9 80,829 + -0.1 80,853 + -0.7 80,854 - +1.7 80,911 + -0.2 80,911 + -0.1 80,911 + -1.3 80,911 + +0.5 80,912 - +0.1 80,912 - -0.1 80,912 - -0.0 80,921 + -0.9 80,921 + -0.9 80,921 + +0.0 80,936 - -0.5 81,740 + +0.6 81,740 + -0.4 81,740 + -0.1 81,740 + -0.9 81,742 + -0.1
Or see this region's nucleotide sequence