Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_28495 and PS417_28500 are separated by 16 nucleotides PS417_28500 and PS417_28505 are separated by 160 nucleotides PS417_28505 and PS417_28510 are separated by 9 nucleotides PS417_28510 and PS417_28515 are separated by 18 nucleotides
PS417_28495: PS417_28495 - ATP synthase F0F1 subunit A, at 6,154,479 to 6,155,348
_28495
PS417_28500: PS417_28500 - ATP synthase F0F1 subunit I, at 6,155,365 to 6,155,772
_28500
PS417_28505: PS417_28505 - chromosome partitioning protein ParB, at 6,155,933 to 6,156,805
_28505
PS417_28510: PS417_28510 - chromosome partitioning protein, at 6,156,815 to 6,157,612
_28510
PS417_28515: PS417_28515 - 16S rRNA methyltransferase, at 6,157,631 to 6,158,275
_28515
Position (kb)
6155
6156
6157 Strain fitness (log2 ratio)
-1
0
1
2 at 6155.850 kb on - strand at 6155.906 kb on - strand at 6155.978 kb on - strand at 6155.978 kb on - strand at 6155.978 kb on - strand at 6155.978 kb on - strand at 6156.817 kb on - strand at 6156.817 kb on - strand at 6156.987 kb on + strand, within PS417_28510 at 6156.987 kb on + strand, within PS417_28510 at 6157.155 kb on + strand, within PS417_28510 at 6157.159 kb on - strand, within PS417_28510 at 6157.159 kb on - strand, within PS417_28510 at 6157.251 kb on + strand, within PS417_28510 at 6157.387 kb on - strand, within PS417_28510 at 6157.387 kb on - strand, within PS417_28510 at 6157.431 kb on + strand, within PS417_28510 at 6157.601 kb on + strand at 6157.650 kb on - strand at 6157.730 kb on + strand, within PS417_28515
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.008 mg/ml remove 6,155,850 - +1.1 6,155,906 - +0.0 6,155,978 - +0.4 6,155,978 - -0.2 6,155,978 - -0.0 6,155,978 - +0.3 6,156,817 - +0.0 6,156,817 - -0.4 6,156,987 + PS417_28510 0.22 -0.3 6,156,987 + PS417_28510 0.22 +0.2 6,157,155 + PS417_28510 0.43 +0.5 6,157,159 - PS417_28510 0.43 +0.6 6,157,159 - PS417_28510 0.43 -0.6 6,157,251 + PS417_28510 0.55 -1.3 6,157,387 - PS417_28510 0.72 -0.7 6,157,387 - PS417_28510 0.72 -1.1 6,157,431 + PS417_28510 0.77 +2.3 6,157,601 + +0.9 6,157,650 - -1.3 6,157,730 + PS417_28515 0.15 -0.3
Or see this region's nucleotide sequence