Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_26635 and PS417_26640 are separated by 330 nucleotides PS417_26640 and PS417_26645 are separated by 274 nucleotides PS417_26645 and PS417_26650 overlap by 8 nucleotides
PS417_26635: PS417_26635 - hypothetical protein, at 5,756,071 to 5,756,310
_26635
PS417_26640: PS417_26640 - hypothetical protein, at 5,756,641 to 5,756,859
_26640
PS417_26645: PS417_26645 - chemotaxis protein, at 5,757,134 to 5,757,589
_26645
PS417_26650: PS417_26650 - histidine kinase, at 5,757,582 to 5,763,386
_26650
Position (kb) 5757
5758 Strain fitness (log2 ratio) -2
-1
0
1 at 5756.272 kb on + strand, within PS417_26635 at 5756.322 kb on + strand at 5756.408 kb on - strand at 5756.498 kb on - strand at 5756.498 kb on - strand at 5756.642 kb on + strand at 5756.652 kb on + strand at 5756.652 kb on + strand at 5756.652 kb on + strand at 5756.652 kb on + strand at 5756.652 kb on + strand at 5756.653 kb on - strand at 5756.653 kb on - strand at 5756.653 kb on - strand at 5756.653 kb on - strand at 5756.653 kb on - strand at 5756.656 kb on + strand at 5756.656 kb on + strand at 5756.656 kb on + strand at 5756.656 kb on + strand at 5756.656 kb on + strand at 5756.656 kb on + strand at 5756.656 kb on + strand at 5756.657 kb on - strand at 5756.657 kb on - strand at 5756.657 kb on - strand at 5756.702 kb on + strand, within PS417_26640 at 5756.702 kb on + strand, within PS417_26640 at 5756.703 kb on - strand, within PS417_26640 at 5756.778 kb on - strand, within PS417_26640 at 5756.778 kb on - strand, within PS417_26640 at 5757.043 kb on - strand at 5757.082 kb on - strand at 5757.125 kb on + strand at 5757.126 kb on - strand at 5757.126 kb on - strand at 5757.135 kb on + strand at 5757.136 kb on - strand at 5757.136 kb on - strand at 5757.136 kb on - strand at 5757.252 kb on + strand, within PS417_26645 at 5757.252 kb on + strand, within PS417_26645 at 5757.311 kb on - strand, within PS417_26645 at 5757.311 kb on - strand, within PS417_26645 at 5758.286 kb on - strand, within PS417_26650 at 5758.301 kb on - strand, within PS417_26650 at 5758.301 kb on - strand, within PS417_26650
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.008 mg/ml remove 5,756,272 + PS417_26635 0.84 +0.6 5,756,322 + +0.8 5,756,408 - -0.0 5,756,498 - -1.0 5,756,498 - +0.0 5,756,642 + +1.2 5,756,652 + +0.0 5,756,652 + +1.0 5,756,652 + +0.0 5,756,652 + -0.2 5,756,652 + +0.6 5,756,653 - -0.7 5,756,653 - -0.9 5,756,653 - -0.3 5,756,653 - +0.2 5,756,653 - -0.0 5,756,656 + +1.0 5,756,656 + -0.9 5,756,656 + -0.2 5,756,656 + -1.5 5,756,656 + -0.2 5,756,656 + +0.2 5,756,656 + -0.3 5,756,657 - -2.5 5,756,657 - +0.3 5,756,657 - -0.9 5,756,702 + PS417_26640 0.28 -0.4 5,756,702 + PS417_26640 0.28 +0.5 5,756,703 - PS417_26640 0.28 +0.2 5,756,778 - PS417_26640 0.63 +1.6 5,756,778 - PS417_26640 0.63 -0.3 5,757,043 - -0.4 5,757,082 - +0.7 5,757,125 + +0.7 5,757,126 - -0.2 5,757,126 - -0.3 5,757,135 + -1.4 5,757,136 - +0.1 5,757,136 - +0.3 5,757,136 - +0.5 5,757,252 + PS417_26645 0.26 -0.8 5,757,252 + PS417_26645 0.26 -0.2 5,757,311 - PS417_26645 0.39 -1.0 5,757,311 - PS417_26645 0.39 +1.4 5,758,286 - PS417_26650 0.12 -1.0 5,758,301 - PS417_26650 0.12 -0.3 5,758,301 - PS417_26650 0.12 -1.0
Or see this region's nucleotide sequence