Strain Fitness in Pseudomonas simiae WCS417 around PS417_24570

Experiment: Paraquat dichloride 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.008 mg/ml
5,330,595	+		PS417_24565	0.43	+1.1
5,330,596	-		PS417_24565	0.43	+0.2
5,330,596	-		PS417_24565	0.43	-0.3
5,330,799	+		PS417_24565	0.62	+0.5
5,330,800	-		PS417_24565	0.62	+0.3
5,330,902	+		PS417_24565	0.72	+0.1
5,330,903	-		PS417_24565	0.72	-0.4
5,331,167	+				+0.4
5,331,167	+				+1.3
5,331,200	-				+0.4
5,331,475	+				+0.0
5,331,481	+				+1.1
5,331,739	+		PS417_24570	0.30	+0.4
5,331,739	+		PS417_24570	0.30	-1.3
5,331,739	+		PS417_24570	0.30	-0.5
5,331,739	+		PS417_24570	0.30	-0.8
5,331,740	-		PS417_24570	0.30	-0.8
5,331,740	-		PS417_24570	0.30	-0.8
5,331,800	-		PS417_24570	0.43	-0.6
5,332,089	+				-0.3
5,332,089	+				-0.3
5,332,089	+				+0.1
5,332,090	-				+0.1
5,332,090	-				-0.4
5,332,090	-				+1.2
5,332,143	+				-0.1
5,332,143	+				-2.2
5,332,144	-				-0.3
5,332,144	-				+0.2
5,332,144	-				-0.4
5,332,144	-				+0.9
5,332,235	+				+0.8
5,332,237	+				-1.0
5,332,349	-		PS417_24575	0.34	+0.6
5,332,483	-				-0.7
5,332,483	-				-0.2
5,332,484	+				-0.1
5,332,485	-				-0.4
5,332,485	-				-0.2
5,332,485	-				+0.7
5,332,601	+		PS417_24580	0.19	+1.1
5,332,613	-		PS417_24580	0.21	-0.3
5,332,644	+		PS417_24580	0.26	+1.1
5,332,653	-		PS417_24580	0.27	-0.2
5,333,002	+		PS417_24580	0.82	+1.6