Strain Fitness in Pseudomonas simiae WCS417 around PS417_23785

Experiment: Paraquat dichloride 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.008 mg/ml
5,147,603	+				+0.6
5,147,607	+				-1.1
5,147,699	+		PS417_23785	0.15	+0.1
5,147,700	-		PS417_23785	0.15	-0.6
5,147,700	-		PS417_23785	0.15	+0.6
5,147,701	+				+0.3
5,147,709	+		PS417_23785	0.17	-0.1
5,147,709	+		PS417_23785	0.17	-0.8
5,147,709	+		PS417_23785	0.17	-0.8
5,147,709	+		PS417_23785	0.17	-1.0
5,147,709	+		PS417_23785	0.17	-0.5
5,147,709	+		PS417_23785	0.17	-0.7
5,147,710	-		PS417_23785	0.17	-0.3
5,147,710	-		PS417_23785	0.17	-0.4
5,147,710	-		PS417_23785	0.17	+0.0
5,147,710	-		PS417_23785	0.17	-1.4
5,147,710	-		PS417_23785	0.17	-2.5
5,147,752	+		PS417_23785	0.24	-1.2
5,147,753	-				-1.5
5,147,753	-		PS417_23785	0.24	-0.2
5,147,753	-		PS417_23785	0.24	+0.5
5,147,753	-		PS417_23785	0.24	-0.4
5,147,753	-		PS417_23785	0.24	-0.1
5,147,753	-		PS417_23785	0.24	+0.2
5,147,753	-		PS417_23785	0.24	-0.4
5,147,782	-		PS417_23785	0.28	-0.3
5,147,890	+		PS417_23785	0.46	-0.3
5,147,890	+		PS417_23785	0.46	+0.1
5,147,891	-				+1.3
5,147,891	-		PS417_23785	0.46	-0.7
5,147,891	-		PS417_23785	0.46	-0.2
5,147,895	+		PS417_23785	0.47	-0.1
5,147,896	-		PS417_23785	0.47	-0.1
5,147,896	-		PS417_23785	0.47	-0.8
5,147,896	-		PS417_23785	0.47	-0.3
5,147,896	-		PS417_23785	0.47	-0.9
5,147,958	+		PS417_23785	0.57	-0.6
5,147,959	-		PS417_23785	0.57	-0.4
5,147,959	-		PS417_23785	0.57	-0.3
5,147,982	+		PS417_23785	0.61	+0.4
5,147,982	+		PS417_23785	0.61	-0.3
5,147,983	-				+2.3
5,147,983	-				+1.9
5,147,983	-		PS417_23785	0.61	-0.4
5,148,080	+		PS417_23785	0.76	+0.4
5,148,080	+		PS417_23785	0.76	-2.3
5,148,081	-		PS417_23785	0.76	-0.5
5,148,159	+		PS417_23785	0.89	-0.4
5,148,159	+		PS417_23785	0.89	+1.3
5,148,159	+		PS417_23785	0.89	-0.7
5,148,160	-		PS417_23785	0.89	-0.5
5,148,160	-		PS417_23785	0.89	-0.3
5,148,161	+		PS417_23785	0.89	+0.1
5,148,193	+				-0.2
5,148,230	+				+0.4
5,148,230	+				+0.2
5,148,230	+				-1.0
5,148,231	-				-0.3
5,148,231	-				+2.0
5,148,255	+				-0.2
5,148,255	+				+0.6
5,148,257	+				-0.9
5,148,258	-				+0.5
5,148,404	+		PS417_23790	0.18	+0.3
5,148,451	+		PS417_23790	0.22	-1.9
5,148,451	+		PS417_23790	0.22	+0.2
5,148,451	+		PS417_23790	0.22	-2.0
5,148,452	-		PS417_23790	0.22	-0.2
5,148,452	-		PS417_23790	0.22	+0.3
5,148,494	+		PS417_23790	0.26	-0.5
5,148,614	-		PS417_23790	0.38	+0.3
5,148,614	-		PS417_23790	0.38	+0.2
5,148,617	+		PS417_23790	0.39	+0.2
5,148,617	+		PS417_23790	0.39	-0.2
5,148,617	+		PS417_23790	0.39	-0.6
5,148,617	+		PS417_23790	0.39	+0.3
5,148,798	-		PS417_23790	0.56	+0.8
5,148,798	-		PS417_23790	0.56	-0.5
5,148,951	-		PS417_23790	0.71	-0.1
5,148,962	+		PS417_23790	0.73	-1.3
5,148,963	-		PS417_23790	0.73	-0.9
5,148,963	-		PS417_23790	0.73	-0.2
5,149,175	+				-0.7
5,149,175	+				-1.1
5,149,175	+				-1.1
5,149,176	-				+0.9