Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22970 and PS417_22975 are separated by 37 nucleotides PS417_22975 and PS417_22980 are separated by 263 nucleotides PS417_22980 and PS417_22985 are separated by 10 nucleotides
PS417_22970: PS417_22970 - ADP-ribose pyrophosphatase, at 4,974,707 to 4,975,255
_22970
PS417_22975: PS417_22975 - hypothetical protein, at 4,975,293 to 4,975,796
_22975
PS417_22980: PS417_22980 - GntR family transcriptional regulator, at 4,976,060 to 4,976,818
_22980
PS417_22985: PS417_22985 - N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) , at 4,976,829 to 4,977,935
_22985
Position (kb)
4976
4977 Strain fitness (log2 ratio)
-1
0
1 at 4975.170 kb on + strand, within PS417_22970 at 4975.291 kb on + strand at 4975.740 kb on - strand, within PS417_22975 at 4975.827 kb on + strand at 4975.860 kb on + strand at 4975.903 kb on - strand at 4975.913 kb on - strand at 4976.111 kb on + strand at 4976.297 kb on - strand, within PS417_22980 at 4976.568 kb on - strand, within PS417_22980 at 4976.573 kb on + strand, within PS417_22980 at 4976.574 kb on - strand, within PS417_22980 at 4976.574 kb on - strand, within PS417_22980 at 4976.744 kb on + strand at 4976.762 kb on + strand at 4976.817 kb on - strand at 4977.179 kb on - strand, within PS417_22985 at 4977.195 kb on + strand, within PS417_22985 at 4977.195 kb on + strand, within PS417_22985 at 4977.228 kb on - strand, within PS417_22985 at 4977.228 kb on - strand, within PS417_22985 at 4977.391 kb on - strand, within PS417_22985 at 4977.391 kb on - strand, within PS417_22985 at 4977.444 kb on + strand, within PS417_22985 at 4977.444 kb on + strand, within PS417_22985 at 4977.445 kb on - strand, within PS417_22985 at 4977.445 kb on - strand, within PS417_22985 at 4977.445 kb on - strand, within PS417_22985 at 4977.446 kb on + strand, within PS417_22985 at 4977.639 kb on + strand, within PS417_22985 at 4977.682 kb on + strand, within PS417_22985
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.008 mg/ml remove 4,975,170 + PS417_22970 0.84 +0.0 4,975,291 + -0.0 4,975,740 - PS417_22975 0.89 +0.3 4,975,827 + -0.6 4,975,860 + -0.0 4,975,903 - -0.8 4,975,913 - -1.3 4,976,111 + +0.5 4,976,297 - PS417_22980 0.31 +0.4 4,976,568 - PS417_22980 0.67 -1.3 4,976,573 + PS417_22980 0.68 -0.1 4,976,574 - PS417_22980 0.68 -0.7 4,976,574 - PS417_22980 0.68 -0.9 4,976,744 + +1.0 4,976,762 + -0.3 4,976,817 - -0.0 4,977,179 - PS417_22985 0.32 +0.6 4,977,195 + PS417_22985 0.33 +0.3 4,977,195 + PS417_22985 0.33 -0.5 4,977,228 - PS417_22985 0.36 +0.1 4,977,228 - PS417_22985 0.36 +0.3 4,977,391 - PS417_22985 0.51 +0.7 4,977,391 - PS417_22985 0.51 +0.0 4,977,444 + PS417_22985 0.56 +0.9 4,977,444 + PS417_22985 0.56 +0.1 4,977,445 - PS417_22985 0.56 -0.5 4,977,445 - PS417_22985 0.56 -0.1 4,977,445 - PS417_22985 0.56 +0.1 4,977,446 + PS417_22985 0.56 +1.3 4,977,639 + PS417_22985 0.73 -0.7 4,977,682 + PS417_22985 0.77 -0.0
Or see this region's nucleotide sequence