Strain Fitness in Pseudomonas simiae WCS417 around PS417_21625
Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,691,109 | + | +0.0 | |||
4,691,110 | - | +0.2 | |||
4,691,358 | - | PS417_21615 | 0.76 | -1.0 | |
4,691,625 | + | -0.1 | |||
4,691,625 | + | -1.4 | |||
4,691,625 | + | -0.4 | |||
4,691,625 | + | -0.6 | |||
4,691,626 | - | +1.9 | |||
4,691,626 | - | +0.1 | |||
4,691,626 | - | +0.6 | |||
4,691,626 | - | -0.1 | |||
4,691,626 | - | -0.6 | |||
4,691,696 | + | +0.2 | |||
4,691,699 | - | +0.1 | |||
4,691,699 | - | -0.1 | |||
4,691,813 | + | +0.3 | |||
4,691,834 | + | +0.1 | |||
4,691,835 | - | +0.2 | |||
4,691,930 | + | +0.4 | |||
4,691,930 | + | -0.9 | |||
4,691,931 | - | -0.1 | |||
4,691,986 | + | -0.4 | |||
4,691,986 | + | +1.2 | |||
4,691,989 | - | +0.7 | |||
4,692,045 | - | PS417_21625 | 0.17 | -1.4 | |
4,692,623 | + | PS417_21630 | 0.14 | +0.5 | |
4,692,632 | + | PS417_21630 | 0.15 | +0.6 | |
4,692,948 | + | PS417_21630 | 0.37 | +1.2 | |
4,693,236 | - | PS417_21630 | 0.57 | -0.4 | |
4,693,293 | - | PS417_21630 | 0.61 | -2.0 |
Or see this region's nucleotide sequence