Strain Fitness in Pseudomonas simiae WCS417 around PS417_21500

Experiment: Paraquat dichloride 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.008 mg/ml
4,667,263	+		PS417_21495	0.23	-0.6
4,667,492	-		PS417_21495	0.46	-0.1
4,667,492	-		PS417_21495	0.46	+0.9
4,667,542	+		PS417_21495	0.51	+0.0
4,667,542	+		PS417_21495	0.51	-0.2
4,667,543	-		PS417_21495	0.51	-0.1
4,667,951	-				+1.0
4,668,025	+				-0.1
4,668,025	+				-0.2
4,668,026	-				-0.7
4,668,026	-				+2.8
4,668,026	-				-0.5
4,668,026	-				+0.6
4,668,049	+				+0.9
4,668,050	-				-0.5
4,668,063	-				+0.7
4,668,127	+				-0.6
4,668,128	-				-0.3
4,668,144	+				+0.7
4,668,145	-				+0.7
4,668,229	+				-0.8
4,668,567	+		PS417_21500	0.30	-0.7
4,668,568	-		PS417_21500	0.30	+1.1
4,668,620	+		PS417_21500	0.34	-1.3
4,668,695	-		PS417_21500	0.40	-1.1
4,668,727	-		PS417_21500	0.42	-0.9
4,668,727	-		PS417_21500	0.42	-1.2
4,668,769	+		PS417_21500	0.45	+0.1
4,668,770	-		PS417_21500	0.45	-1.7
4,668,770	-		PS417_21500	0.45	-0.3
4,668,810	+		PS417_21500	0.48	+0.1
4,668,810	+		PS417_21500	0.48	-1.4
4,668,811	-		PS417_21500	0.49	-0.5
4,668,851	+		PS417_21500	0.52	-1.0
4,668,852	-		PS417_21500	0.52	-1.8
4,669,251	+		PS417_21500	0.82	-0.1
4,669,252	-		PS417_21500	0.82	-1.4
4,669,461	+				-2.3
4,669,462	-				-1.0
4,669,462	-				-0.3
4,669,473	+				-0.9
4,669,473	+				-0.3
4,669,529	-				+0.1
4,669,601	+				-1.0
4,669,846	+				-0.7
4,669,907	+				+0.9
4,669,907	+				-1.1
4,670,030	+		PS417_21505	0.20	+0.3
4,670,031	-		PS417_21505	0.20	-0.6
4,670,133	+		PS417_21505	0.30	-0.1
4,670,136	+		PS417_21505	0.30	-0.3
4,670,136	+		PS417_21505	0.30	-0.8
4,670,137	-		PS417_21505	0.30	-0.3
4,670,141	+		PS417_21505	0.31	-0.3
4,670,149	-		PS417_21505	0.31	+0.2
4,670,357	+		PS417_21505	0.52	+0.3