Strain Fitness in Pseudomonas simiae WCS417 around PS417_19500
Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,227,394 | + | PS417_19495 | 0.38 | +0.4 | |
4,227,394 | + | PS417_19495 | 0.38 | -1.6 | |
4,227,394 | + | PS417_19495 | 0.38 | +0.0 | |
4,227,394 | + | PS417_19495 | 0.38 | -0.2 | |
4,227,769 | + | PS417_19495 | 0.66 | -0.3 | |
4,227,855 | - | PS417_19495 | 0.73 | -0.3 | |
4,227,855 | - | PS417_19495 | 0.73 | -1.1 | |
4,228,198 | + | -0.0 | |||
4,228,199 | - | +0.3 | |||
4,228,426 | + | PS417_19500 | 0.34 | -1.3 | |
4,228,427 | - | PS417_19500 | 0.34 | -0.7 | |
4,228,510 | + | PS417_19500 | 0.71 | -0.5 | |
4,228,563 | + | -0.1 | |||
4,228,564 | - | +1.0 | |||
4,228,625 | + | +0.4 | |||
4,228,625 | + | -0.5 | |||
4,228,626 | - | +0.0 | |||
4,228,626 | - | -0.0 | |||
4,229,405 | + | PS417_19505 | 0.54 | +1.5 |
Or see this region's nucleotide sequence