Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_18735 and PS417_18740 are separated by 21 nucleotides PS417_18740 and PS417_18745 overlap by 4 nucleotides PS417_18745 and PS417_18750 are separated by 50 nucleotides PS417_18750 and PS417_18755 overlap by 1 nucleotides PS417_18755 and PS417_18760 are separated by 130 nucleotides
PS417_18735: PS417_18735 - histidinol phosphatase, at 4,066,858 to 4,067,622
_18735
PS417_18740: PS417_18740 - acetyltransferase, at 4,067,644 to 4,068,141
_18740
PS417_18745: PS417_18745 - hypothetical protein, at 4,068,138 to 4,068,362
_18745
PS417_18750: PS417_18750 - esterase, at 4,068,413 to 4,069,339
_18750
PS417_18755: PS417_18755 - CrtK, at 4,069,339 to 4,069,779
_18755
PS417_18760: PS417_18760 - hypothetical protein, at 4,069,910 to 4,070,479
_18760
Position (kb) 4068
4069
4070 Strain fitness (log2 ratio) -1
0
1
2
3 at 4067.509 kb on - strand, within PS417_18735 at 4067.569 kb on + strand at 4067.570 kb on - strand at 4067.570 kb on - strand at 4067.662 kb on - strand at 4067.765 kb on + strand at 4067.766 kb on - strand, within PS417_18740 at 4067.790 kb on + strand, within PS417_18740 at 4067.894 kb on + strand, within PS417_18740 at 4068.100 kb on - strand at 4068.123 kb on + strand at 4068.340 kb on + strand at 4068.341 kb on - strand at 4068.341 kb on - strand at 4068.341 kb on - strand at 4068.341 kb on - strand at 4068.352 kb on + strand at 4068.353 kb on - strand at 4068.363 kb on - strand at 4068.414 kb on + strand at 4068.445 kb on + strand at 4068.459 kb on + strand at 4068.460 kb on - strand at 4068.499 kb on + strand at 4068.500 kb on - strand at 4068.636 kb on + strand, within PS417_18750 at 4068.731 kb on + strand, within PS417_18750 at 4068.731 kb on + strand, within PS417_18750 at 4068.790 kb on - strand, within PS417_18750 at 4068.792 kb on + strand, within PS417_18750 at 4068.793 kb on - strand, within PS417_18750 at 4068.793 kb on - strand, within PS417_18750 at 4068.793 kb on - strand, within PS417_18750 at 4068.793 kb on - strand, within PS417_18750 at 4068.793 kb on - strand, within PS417_18750 at 4069.333 kb on - strand at 4069.634 kb on + strand, within PS417_18755 at 4069.720 kb on - strand, within PS417_18755 at 4069.820 kb on + strand at 4069.820 kb on + strand at 4069.820 kb on + strand at 4069.820 kb on + strand at 4069.821 kb on - strand at 4069.821 kb on - strand at 4069.821 kb on - strand at 4069.821 kb on - strand at 4069.821 kb on - strand at 4069.958 kb on - strand at 4069.958 kb on - strand at 4069.978 kb on + strand, within PS417_18760 at 4070.055 kb on + strand, within PS417_18760 at 4070.055 kb on + strand, within PS417_18760 at 4070.055 kb on + strand, within PS417_18760 at 4070.289 kb on + strand, within PS417_18760 at 4070.302 kb on - strand, within PS417_18760
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.008 mg/ml remove 4,067,509 - PS417_18735 0.85 +1.1 4,067,569 + +2.0 4,067,570 - -0.1 4,067,570 - +0.2 4,067,662 - +0.2 4,067,765 + +0.4 4,067,766 - PS417_18740 0.24 -0.5 4,067,790 + PS417_18740 0.29 -0.1 4,067,894 + PS417_18740 0.50 +0.2 4,068,100 - -0.1 4,068,123 + -1.5 4,068,340 + +0.4 4,068,341 - -0.9 4,068,341 - -0.2 4,068,341 - +1.0 4,068,341 - +0.0 4,068,352 + -0.1 4,068,353 - -0.4 4,068,363 - +0.3 4,068,414 + +1.2 4,068,445 + +0.0 4,068,459 + -1.3 4,068,460 - +0.5 4,068,499 + -0.3 4,068,500 - -0.5 4,068,636 + PS417_18750 0.24 +0.2 4,068,731 + PS417_18750 0.34 -0.5 4,068,731 + PS417_18750 0.34 +0.1 4,068,790 - PS417_18750 0.41 -0.8 4,068,792 + PS417_18750 0.41 +0.0 4,068,793 - PS417_18750 0.41 -0.5 4,068,793 - PS417_18750 0.41 -0.6 4,068,793 - PS417_18750 0.41 -1.2 4,068,793 - PS417_18750 0.41 -0.5 4,068,793 - PS417_18750 0.41 -1.3 4,069,333 - +2.4 4,069,634 + PS417_18755 0.67 +0.7 4,069,720 - PS417_18755 0.86 -1.1 4,069,820 + -0.2 4,069,820 + +0.8 4,069,820 + +0.4 4,069,820 + -1.0 4,069,821 - +0.6 4,069,821 - -0.0 4,069,821 - +2.0 4,069,821 - -0.3 4,069,821 - -0.6 4,069,958 - -0.3 4,069,958 - -0.7 4,069,978 + PS417_18760 0.12 +1.0 4,070,055 + PS417_18760 0.25 +0.3 4,070,055 + PS417_18760 0.25 +2.8 4,070,055 + PS417_18760 0.25 +0.0 4,070,289 + PS417_18760 0.66 +0.2 4,070,302 - PS417_18760 0.69 -1.2
Or see this region's nucleotide sequence